Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1720 ATGGCGATCATGAAGCTTTACTCTCTCTACATTTTCCTGTCCTTCTTCTTCTGCTACACCAAAGCCAGTCACATCACTGAGTCTTTCTCTTCATCTACGTCCTCCGACGTTGAGCTTCTCTTGGAAAAAATCAGAGCTTTACTGCAAGGTAACACTGAGAACATTGTTTTGTCTTCCTGGAACTCCTCTGTACCACTTTGCCAATGGAAGGGCCTGAAATGGGTCTTCTCCAATGGCTCTCCCCTGTCATGCAGCGACTTGTCCTCACCACAATGGAACAATTTTTCACTGTTTAAAGACCCTTCTCTTTACTTGCTCTCTCTTCAACTTCCATCTGCCAATCTCTCTGGTTCAGTTCCTAGAGAGCTCGGAGAGTTCCCTATGCTTCAAAGCCTCTATCTCAACTTCAATTCGTTGAAAGGAACAGTCCCTCTTGAGCTTGGCTATAGTTCCTCCCTCTCCGACGTCGATTTGGGTGACAATTTGCTGAGTGAAGCGCTGCCCCCATCGATCTGGAATTTGTGTGATAGGCTTGTTTCCCTTAGACTTCATGGTAATTCATTTTCGGGGCCACTTCCTGAACCAGCATTGCCAAATTCTTCTTGTAAGAATTTGCGATTTCTTGATTTGGGTAACAACAAGTTTTCTGGTAATTTCCCGGCATTCATTACCCGCTTTGGTGGGCTAAAGCAGCTTGAATTGGGGAATAATATGTTTATAGGTTCAATTCCTCAAAGTTTAGCGGGGCTAAGGCTTGAGAAATTGAACCTTTCCCACAATAATTTCAGTGGTGTTCTGCCTATTTTTCAAGAATCCAAATTTGGTTTGGAGGTTTTTGAGGGAAATAACCCAGGTTTGTGTGGACCACCTCTGAGAAGTTGCAGTGGAAATTCTAGACTAAGTTCTGGTGCCATCGCTGGTATAGTTATTACTCTGTTGGCTGGAACCGTGGTTTTAGCTTCTTTGTTAGTTGGCTATGTGCAAAACAAGAAGAGGAAGGGTAGGGGAGAGAGTGATAATGACTTGGAGGAAGAAGAAGATGAAGAAAATGGGGATAGTGATGTTGGTGGTGGTGGTGAGGGGAAGCTTATGTTGTTCCAGGGCGATGAGAATTTGACATTGGACGATGTGCTGAATGCAACTGGACAAATTTTGGAGAAGACATGTTATGGGACTGCGTATAAAGCAAAGCTGGCTGATGGAGGGACCATTGCTTTGAGGTTGTTGAGAGAAGGTTACTGCAAGGATAGGGCTTCAAGCATGCCAGTTATTAAGCAACTGGGAAAAATTCGTCATGAGAATTTGATTCCATTAAGAGCTTTCTATCAGGGGAAGCGAGGGGAGAAGCTCCTTATTTATGACCATCTACCTCTCAGAACCCTTCATGATCTTCTACATGAACCTAAAGCAGGAAAACCCATGCTGAACTGGGCTAGGCGACACAAGATTGCATTGGGGATAGCAAGAGGGCTTGCATATCTTCATACAGGACTTGATGCTCCCATTACTCATGGGAGTGTAAGATCCAAGAATGTGCTTGTGGATGAATTTTTTGTTGCCAGGCTCACTGAGTTTGGGCTTGATAAGCTAATGATTCCAGCAGTAGCGGATGAAATGGTGGCACTTGCTAAGACCGATGGCTTCAAGGCTCCCGAGCTTCAAAAGATGAAAAAGTGTAACTCAAGAACAGATGTTTATGCATTTGGCATATTATTGTTGGAGATTTTGATTGGGAAGAAACCTGGAAAAAATGGGAGAGGTAGTGAGTATGTGGATTTGCCTTCAATGGTAAAAGTAGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGGGGAAATTTTGAAAGGGATAAGAAGTCCCATGGAAGATGGGTTGGTTCAGGCTTTGAAGCTAGCAATGGGTTGCTGTGCACCAGTGGCTTCAGTTAGACCCAGCATGGATGAAGTTGTAAGACAGTTGGAGGAGAGCAGACCAAGAAATAAGTCTGCGTTATACAGCCCTACAGAAACAAGAAGCGGAAGTGGTACCCCATTTTGA 2040 0.4407 MAIMKLYSLYIFLSFFFCYTKASHITESFSSSTSSDVELLLEKIRALLQGNTENIVLSSWNSSVPLCQWKGLKWVFSNGSPLSCSDLSSPQWNNFSLFKDPSLYLLSLQLPSANLSGSVPRELGEFPMLQSLYLNFNSLKGTVPLELGYSSSLSDVDLGDNLLSEALPPSIWNLCDRLVSLRLHGNSFSGPLPEPALPNSSCKNLRFLDLGNNKFSGNFPAFITRFGGLKQLELGNNMFIGSIPQSLAGLRLEKLNLSHNNFSGVLPIFQESKFGLEVFEGNNPGLCGPPLRSCSGNSRLSSGAIAGIVITLLAGTVVLASLLVGYVQNKKRKGRGESDNDLEEEEDEENGDSDVGGGGEGKLMLFQGDENLTLDDVLNATGQILEKTCYGTAYKAKLADGGTIALRLLREGYCKDRASSMPVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDHLPLRTLHDLLHEPKAGKPMLNWARRHKIALGIARGLAYLHTGLDAPITHGSVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKTDGFKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRGSEYVDLPSMVKVAVLEETTMEVFDGEILKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEESRPRNKSALYSPTETRSGSGTPF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1720 679 Gene3D Phosphorylase Kinase; domain 1 362 455 - -
Glsi06g1720 679 Gene3D Transferase(Phosphotransferase) domain 1 457 672 - -
Glsi06g1720 679 Gene3D Ribonuclease Inhibitor 37 175 IPR032675 -
Glsi06g1720 679 MobiDBLite consensus disorder prediction 660 679 - -
Glsi06g1720 679 Pfam Leucine rich repeat 204 262 IPR001611 GO:0005515
Glsi06g1720 679 MobiDBLite consensus disorder prediction 340 354 - -
Glsi06g1720 679 ProSiteProfiles Protein kinase domain profile. 379 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1720 679 MobiDBLite consensus disorder prediction 332 358 - -
Glsi06g1720 679 MobiDBLite consensus disorder prediction 655 679 - -
Glsi06g1720 679 Gene3D Ribonuclease Inhibitor 176 296 IPR032675 -
Glsi06g1720 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 194 IPR046959 -
Glsi06g1720 679 SUPERFAMILY L domain-like 77 292 - -
Glsi06g1720 679 FunFam Leucine-rich repeat receptor-like protein kinase 202 294 - -
Glsi06g1720 679 SUPERFAMILY Protein kinase-like (PK-like) 383 655 IPR011009 -
Glsi06g1720 679 Pfam Protein tyrosine and serine/threonine kinase 384 654 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1720 Glsi-ChrGlsi06 63994459 63999030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1720 10 679 Receptor kinase-like Gene Family AT3G24660 71.684 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi06g1720 PK_Tyr_Ser-Thr 3.7e-23 CL0016