Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1714 ATGGAACTAAATAAGCCAGAAAACTTGTTAGTTGCCAACACTAGGAAGGCTCCTGGAGTGTTGGCTCAACACACCCATCCCGACTCAGCCAGTGATGTTTTAAATACAGGGCAGAACGTACATAATAATATCCCTACACAGGCAGGGGAAGAATTTTCTGTGGAGTTTGGTCATGATGGAATTTCTGCTAGAAGAGTTCCTGCTGCATCTGATTCACTTCGAAAACACGAAGGTAGGTTTGGATTTCATAGGGAGAATGGCCATGTGAGATATGAAGATCTTACTTATATCTTGGGGTTGAAGAGAATGGACTCTGAGAATCCTTCTGACATTGCTGACCTTAGCTCTGTGAAAGAGCCAGCTCAAGATATGGAAAATGGGGCATTTGTTAATAAATTTGGCAACAACCATAGGGAAGATGGTAATAGTATTAGTACGCATGGATTCAGGAAGCCTCCTGGTGAATCAGTTGGTGACCAACCTGACATCGGGTCAGCTGGTTCTTTTTTTCTCAGACAAGAATCCTCCTATTCCAATGAATTTTCTGGTTTAGGAGTTTCAGATGATTCTCAATCTGGGAAATCTCAATATGGGAAAATAAAGTTTCTATGCAGCTTTGGTGGAAAAATATTACCCAGGCCCAGTGATGGGAAACTCAGATATGTTGGGGGAGACACTCGAATTATATCTATACGAAATAATATTTCATGGAAAGAGCTTGTAAAGAAGACCTTGGGCATTTGCAACCAACCTCACACAATTAAATACCAGCTTCCAGGGGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTCCAAAATATGATAGAAGAATACCATGTGCCTGAAAAGCATGAAGGATCTCAAAGACTTAGAATTTTTTTAATTCCTTTGAGTGAGTCTGAAAAGGAATCTTCATTTGAGCCAAGCACTATTCAGCAGAGTGATCCCAATTACCAATATGTTGTTGCTGTGAATGGCATAGGAGATTGTAGTCCAAGAATAAACGTTCCTGGGCAGAGTTTGACAAATGAAGCTAGTCAGTTAGGGAAAAATTGGAATTTTGCTCCAGATTTTCAGATAAGTTCTCCAAGTGCCCCTTATCCTTTAGAGATCATGAGTGGTGGTAGTGCTATACATCCAGATGGATTTTTTAATGACTCTCAGAATTTGCAAAGGTCCGCCAATCAATATCAGCCAGTTTCTCCAATTCCATTTCAAGGAGGAGGTTTAAGCACAGTTTATCCACAGTTGCAGGGTAACAACTCATGCCAAGGAAGTGCTGAGAGTGGCATATCCTTTATTACTGCCCAACTACCACCTGAGAACTCAAGCATAAGTGCTGCTGATGACAGATACTCCCAACAAATGGCTATGAATTTCCAAAGTGATAGTCACCCTTATCAAAAAGCTGATGTTGGCCTGCCAGAGCAGCACTGTGGAAGGCCTTTTGGCAACTTCAATCCTGGCAAGGAATTCGTGATTCCTTCATATGCTAACCAAAGTGATGGTTATAATGATGAAATTTTGGGTGAAAGGTCCATGCATGAGGACAGAAGAGTCCAGTCTGGAAATCCTCTTTCGTGCTTGGGTGAGTCAATTTGTCCACAGTCTGGATCTAATGGTATTACTGATTCTCTAAATGGGATACCTCATGCATTTTCTGATTCAAAGTTGCATGAGAGTGGTATAAGGTCTGGTTACTGCTCACAAGAAGGAATCAGTCAATCTTACTCATTGAACCTTTCAAAGGCTCAGCTATCTTCAATGGTAGCCCCTGGTGTTTCACAAAGGAACCCTGTGGAGGTCCAGTATGATTCCAGTCTCACTTATCCTCAAACACAAAGTAAGATGCCAAATGTTGAGCCAGCTGAGTTGCACAGAAGGCAGGATTTACCATTTTCTTGCCCATATGCAGAATGTTTAGAAGTAAATGAGCATGTTCATAAGGATAGCATTTTATCCAATAAAAGTCACCCTTTAGCTCACACTGATTTAAGTGTTATAGTGCAGCAGTGTGGGGACAATGCTGTGACTTTCCAAATGATGAAGACAACTGAAGACAAGAATCCTATTCAGAGTAAGGATAGCAATCTTTGCGAGGGGAAATCACCTGCCATTGCTATGGGACATGTGAATGAATTGCATCTTCTGGACTCCTTCCCAGCTTCTAATTTTAATATTGATATTAATAAACAAAAGCAATGGGAGCAATCTTCTGAGGGTATGATTTCTGCATCCTCAGGTGTGATGGGAATCTCCCAAAACAATCTGATCCAGAAGACCCCATCTGATCTTCTTGACAGGAGCCACAGGATTAGAGATGGAAAAGAATGTGGTTTAGCTGAAGGTTTCAATGGTGCACGAGGATTTGATTTTTCATTGACTGGCTTAAATGGTTCATTTCTAAAATGTGAAGGAAACTCTTGTGAAAAATCTTCTCTAGGTGATAATTTGTTTGAGCTGCCCATTGACTCAGTTTCTCATAAGTATGCACAAGTTCAACCTTCTTTTATTCAGAAGGATACATGTCTCCATGAAAGTCCAACAGTAAGCTCTGCATGTTTGTGTTCTGCAGTACTTCATGATGATCCTGGTCCAAGTTCAAATTTGCTTATGAATAACCTGCAGAAGCCGAGCAAGAATATGGCATTTAAGAAAGTACCTTCTCTTCTTGATGATGACTTTATTGATAGTACTGATCAAATGGTTGATCAGTGTACTGGTGGACACTTTGTCTCTGAACAAAAAGTTGAAGATATCATGTTGGGGCAATCAAAAAATTTAGAAAAGCTTGATGATTCAAAAAAAGTGGAGCCACTTGTTATTGTAGAAGATGTGACTGATGTAGTTTCTTCTGGTGTTGAGTCTTCATTGGTGCCCACCCCGCACACCCCACACACTGGGGATGAAATTGGAAGTGATGTTACATCCCCATCTGCAACAGAGGTGGAGAGTGTCATCCCAGAGTCTGAACCTGAGGATTTTAAAGATGATGAAGCAGACAATAATGAATCCCTTACCGATGCAATGATAGCAGAAATGGAAGCCAGCATCTATGGGTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTCGGGAGTTAGGATCTGGTACTTACGGAACTGTTTATCATGGAAAATGGAGGGGAACAGATGTTGCTATAAAAAGAATTAAAAAGAGCTGCTTTGCAGGAAGATCTTCTGAGCAAGAACGATTGACAAAAGACTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGGGTCGTACCGGATGGAGCTGGGGGAACCTTGGCAACTGTAACCGAGTATATGGTTAATGGTTCCCTCAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCGTCGTAAAAGGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATTTGAGGGATCCTCAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCTAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCATGGATGGCTCCAGAGCTGCTGAATGGCAGCAGCAGCCGGGTTTCTGAGAAGGTCGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGGATTGTAAAGAACACTCTTCGACCTCCAATTCCAGAACGTTGTGATCCTGAATGGAAGAAGCTTATGGAAGAGTGTTGGTCACCTGACCCTGATAGCCGACCAACATTTACTGAGATAACTGGCCAACTACGATCTATGTCTATTGCCCTTCAAGCGAGGGGACATAATCATGCACGGCAGATACGACCTAGTGTTCATTCTTGA 3963 0.4158 MELNKPENLLVANTRKAPGVLAQHTHPDSASDVLNTGQNVHNNIPTQAGEEFSVEFGHDGISARRVPAASDSLRKHEGRFGFHRENGHVRYEDLTYILGLKRMDSENPSDIADLSSVKEPAQDMENGAFVNKFGNNHREDGNSISTHGFRKPPGESVGDQPDIGSAGSFFLRQESSYSNEFSGLGVSDDSQSGKSQYGKIKFLCSFGGKILPRPSDGKLRYVGGDTRIISIRNNISWKELVKKTLGICNQPHTIKYQLPGEDLDSLISVSSDEDLQNMIEEYHVPEKHEGSQRLRIFLIPLSESEKESSFEPSTIQQSDPNYQYVVAVNGIGDCSPRINVPGQSLTNEASQLGKNWNFAPDFQISSPSAPYPLEIMSGGSAIHPDGFFNDSQNLQRSANQYQPVSPIPFQGGGLSTVYPQLQGNNSCQGSAESGISFITAQLPPENSSISAADDRYSQQMAMNFQSDSHPYQKADVGLPEQHCGRPFGNFNPGKEFVIPSYANQSDGYNDEILGERSMHEDRRVQSGNPLSCLGESICPQSGSNGITDSLNGIPHAFSDSKLHESGIRSGYCSQEGISQSYSLNLSKAQLSSMVAPGVSQRNPVEVQYDSSLTYPQTQSKMPNVEPAELHRRQDLPFSCPYAECLEVNEHVHKDSILSNKSHPLAHTDLSVIVQQCGDNAVTFQMMKTTEDKNPIQSKDSNLCEGKSPAIAMGHVNELHLLDSFPASNFNIDINKQKQWEQSSEGMISASSGVMGISQNNLIQKTPSDLLDRSHRIRDGKECGLAEGFNGARGFDFSLTGLNGSFLKCEGNSCEKSSLGDNLFELPIDSVSHKYAQVQPSFIQKDTCLHESPTVSSACLCSAVLHDDPGPSSNLLMNNLQKPSKNMAFKKVPSLLDDDFIDSTDQMVDQCTGGHFVSEQKVEDIMLGQSKNLEKLDDSKKVEPLVIVEDVTDVVSSGVESSLVPTPHTPHTGDEIGSDVTSPSATEVESVIPESEPEDFKDDEADNNESLTDAMIAEMEASIYGLQIIRNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPERCDPEWKKLMEECWSPDPDSRPTFTEITGQLRSMSIALQARGHNHARQIRPSVHS 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1714 1320 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1026 1120 - -
Glsi06g1714 1320 PRINTS Tyrosine kinase catalytic domain signature 1115 1128 IPR001245 GO:0004672|GO:0006468
Glsi06g1714 1320 PRINTS Tyrosine kinase catalytic domain signature 1152 1170 IPR001245 GO:0004672|GO:0006468
Glsi06g1714 1320 PRINTS Tyrosine kinase catalytic domain signature 1223 1245 IPR001245 GO:0004672|GO:0006468
Glsi06g1714 1320 PRINTS Tyrosine kinase catalytic domain signature 1267 1289 IPR001245 GO:0004672|GO:0006468
Glsi06g1714 1320 MobiDBLite consensus disorder prediction 957 1005 - -
Glsi06g1714 1320 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1121 1312 - -
Glsi06g1714 1320 Gene3D Phosphorylase Kinase; domain 1 1026 1120 - -
Glsi06g1714 1320 Pfam PB1 domain 216 298 IPR000270 GO:0005515
Glsi06g1714 1320 CDD PB1_UP2 203 299 - -
Glsi06g1714 1320 MobiDBLite consensus disorder prediction 991 1005 - -
Glsi06g1714 1320 MobiDBLite consensus disorder prediction 974 988 - -
Glsi06g1714 1320 PANTHER SERINE-THREONINE PROTEIN KINASE 244 1297 - -
Glsi06g1714 1320 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1158 1170 IPR008271 GO:0004672|GO:0006468
Glsi06g1714 1320 CDD STKc_MAP3K-like 1039 1296 - -
Glsi06g1714 1320 Gene3D Transferase(Phosphotransferase) domain 1 1121 1316 - -
Glsi06g1714 1320 ProSiteProfiles Protein kinase domain profile. 1033 1303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1714 1320 Gene3D - 218 300 - -
Glsi06g1714 1320 SMART serkin_6 1033 1302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1714 1320 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 219 301 - -
Glsi06g1714 1320 Pfam Protein tyrosine and serine/threonine kinase 1034 1296 IPR001245 GO:0004672|GO:0006468
Glsi06g1714 1320 SUPERFAMILY CAD & PB1 domains 215 303 - -
Glsi06g1714 1320 SMART PB1_new 214 301 IPR000270 GO:0005515
Glsi06g1714 1320 SUPERFAMILY Protein kinase-like (PK-like) 1021 1293 IPR011009 -
Glsi06g1714 1320 ProSitePatterns Protein kinases ATP-binding region signature. 1039 1064 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1714 Glsi-ChrGlsi06 63889469 63900140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1714 47 331 MAP Kinase Kinase Kinase AT1G16270 39.931 8.19e-40 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Glsi06g1714 PK_Tyr_Ser-Thr 1.2e-63 CL0016