Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1712 ATGGCTTCGAGTCCAGTGGAAGGATCAACGTTTCCTATGGACGATTACGAGACTTTGCTTTCGACGACCGACGTTGAGCTGCTGAAGAGAGCATGGCGTAACGAGAAGGCCGCCCCCGAGGTTCTTCGTTTCGAGACCGATTTGATTGACCGCATTAGAGAACAGATCCAATTAATGGAGGAAACAGTGGAGGAGAAATCAACTGGTGGTATTGACCCCCTTTCAATATCTCTCTATCAGATGGACTTGGATAGAACCCAGTTTTTATTAAGATCATATCTCCGGATCCGCATCCAGAAGATTGAAAAATACATGTTCCACATAGCAAAAACTGAGGAACTTTGGAACAGGCTGTCTAGAGAAGAGAAAAGTTTCATTAGAAGGAAAGGCAATTCTTCTTTTCCAGGATTTTTTTTGCTACAAATATGCACAATACAATTGATGCATGTCTGGGAATCTGTCAAAATTGCCTTGCCTGAAAGCTATCAGTCAGTTCTGAAATATAGCCATATAGTGGATGTTGGAAATCTCCTGACACCATTGAAACATTTATTGAATGACATGTTTTTTTGGTATGTTTCAGTCCCAGAACCACAACTAGACACATTTGTTGTATGCAGAAGCAAAGAGTACCTCACAGGTATCCAGCTCGAGGATGGACCGGTTGATGACAGGTCAAAGCTGTTTGAGATGGAGCCTGGTGTCCTCTACTTCATATGTTACAAGTCTATAAAGGCACTTGTAGAGAGCGGGAAAATTGATCTGCTCTGA 771 0.4241 MASSPVEGSTFPMDDYETLLSTTDVELLKRAWRNEKAAPEVLRFETDLIDRIREQIQLMEETVEEKSTGGIDPLSISLYQMDLDRTQFLLRSYLRIRIQKIEKYMFHIAKTEELWNRLSREEKSFIRRKGNSSFPGFFLLQICTIQLMHVWESVKIALPESYQSVLKYSHIVDVGNLLTPLKHLLNDMFFWYVSVPEPQLDTFVVCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLYFICYKSIKALVESGKIDLL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1712 256 PANTHER SLD5 PROTEIN 13 256 IPR008591 GO:0006261
Glsi06g1712 256 CDD GINS_B_Sld5 198 256 IPR031633 -
Glsi06g1712 256 CDD GINS_A_Sld5 24 128 IPR038749 -
Glsi06g1712 256 PIRSF GINS_Sld5 2 256 IPR008591 GO:0006261
Glsi06g1712 256 SUPERFAMILY GINS helical bundle-like 21 128 IPR036224 -
Glsi06g1712 256 SUPERFAMILY PriA/YqbF domain 200 256 - -
Glsi06g1712 256 FunFam DNA replication complex GINS protein SLD5 11 246 - -
Glsi06g1712 256 Gene3D - 12 246 - -
Glsi06g1712 256 Pfam GINS complex protein 64 123 IPR021151 -
Glsi06g1712 256 Coils Coil 42 62 - -
Glsi06g1712 256 Pfam DNA replication complex GINS protein SLD5 C-terminus 198 256 IPR031633 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1712 1 182 Core DNA Replication Machinery Family AT5G49010 54.645 1.08e-58 183