Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1688 ATGGCAGAAGCTATTACTAAAGCTGAGATTGTATCCATAGAGACCATAAAGCCATCATCTCCAACCCCATGTCACCTTAAACACTTCAAAATCTCTCTCCTCGATCAGCTAGCTCCTCCATCATTCTACGTTCCCATTGTCCTCTTCTACTCTTCATCTGATACCAAAGCTTTTGCTTCTGATTTTGCTGAGATATCTGAGAAGTTGAAGACTTCGTTATCAGAAGTTCTTACTCTCTATTACCCATTCTGTGGAAGAATATTGAAAGGAAAAAATGACTCCGTGGATTGCAACGATGCAGGTGTTGTTTACCTTGAAGCTAGAGTTCCCTGTAAGCTCTCAGATTTTCTCAAGAATCCACAGTCCAATGAGATAAAAGGGTTTCTTCCATTCGATCCTTACAACCCAAAACCAGATCATAATGATCATGATCAAGAAGAACCTGTGAACATGGCAGTTCAGGTTAGTGAATTCAGCTGTGGAAGTGTAGGAATTGGCGTGTGCATCTCACACAAGGTTGCTGATGGTGCAACGGCAGCTTCATTTCTCCATGCTTGGTCTGAAATGGCAATGGAAAATGAAAGCACAGTGGCTGCTCCTCCCATGGAAGCAGCTTCACTTTTCCCACCAAGAGACATGAGAATGAACCCAACCAGTGGAATGATTGGTGAGAAAAACATAGCAACAAGGAGATTCATATTTGATGGAACAAGCTTGTCTAGGCTAAGAGCTAGACTTTCTGGATACAACCCAACTCGAGTTGAAGCTGTGACTGCTCTGATATGGAAATCAGCCATGGAAGCTGCAGCTAGAGAAGGCTCATCCATGGTGACACATGCGGTGAACATCCGCAGCCGGATGACACCACCATTGCCGGAAAATTCCATGGGCAATCTCTGGCAAATAGCTGCTTCTCCATTGTTTCTTCAGGAAGCTGAAAGATCAATGGAGCTGCAAGATTTGGCAGAGGTGGTGAGAAGAACCATAAGAAAAGTTGATGGAGATTATGTGAGTAAGTTTCAGGGAGATGATGAAGCTGGGCTTGCTGAAGTTCTTGAGTCCTTGAAAGAGGTGATGGTTTTGGTGTCCAGAAGAGGTGTTCCTTGTTATAGCTTTAGCAGCTGGGCAAGGTTCTGTTTCTATGAAACAAACTTTGGATGGGGGAATCCAACCTGGGTGTGTACCATTGGAGTGCCTATAAAAAATGTTGTCATTTTGATGCCTACAAGATCTGGGGATGGAATCGAGGCATGGGTGACCTTAAATGAGCTTGATATGGTCAAATTTGAGCAAAACCCAGAGCTTCTTCAATTTGCTTCTTCAGTTTGA 1329 0.4357 MAEAITKAEIVSIETIKPSSPTPCHLKHFKISLLDQLAPPSFYVPIVLFYSSSDTKAFASDFAEISEKLKTSLSEVLTLYYPFCGRILKGKNDSVDCNDAGVVYLEARVPCKLSDFLKNPQSNEIKGFLPFDPYNPKPDHNDHDQEEPVNMAVQVSEFSCGSVGIGVCISHKVADGATAASFLHAWSEMAMENESTVAAPPMEAASLFPPRDMRMNPTSGMIGEKNIATRRFIFDGTSLSRLRARLSGYNPTRVEAVTALIWKSAMEAAAREGSSMVTHAVNIRSRMTPPLPENSMGNLWQIAASPLFLQEAERSMELQDLAEVVRRTIRKVDGDYVSKFQGDDEAGLAEVLESLKEVMVLVSRRGVPCYSFSSWARFCFYETNFGWGNPTWVCTIGVPIKNVVILMPTRSGDGIEAWVTLNELDMVKFEQNPELLQFASSV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1688 442 Pfam Transferase family 8 435 - -
Glsi06g1688 442 Gene3D - 224 437 IPR023213 -
Glsi06g1688 442 Gene3D - 5 218 IPR023213 -
Glsi06g1688 442 PANTHER F21J9.9 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1688 Glsi-ChrGlsi06 63535555 63536883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1688 7 431 Monolignol Biosynthesis Gene Families AT5G48930 25.658 3.89e-32 125