Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1666 ATGTCTCTTCCAAGACCCACGGAGCAGCAGCAGCTGAAGGAAGGAGTGGCAGCCTCCTCCTCCTCTTCTTCTTGGAATAGGCTTAACAACCATACCAACTCTTTCCCTCCTTCACACAAGAGAAGCAAAATTGAAGACAGCGATGAAGATCTGTTCACGGTTCCAGACGTGGAAGCCACAGAAACTGTCCAATCTGGAGGGACAATTTCAAATATGAACGTCAAGCAAAGCAACGAGAAGGACCCTCAGTTTCCAGCTGGGTTTCAAGGAAAGCGCAGAAGGGGACGAAACCCTGCAGATAAGGAATGCAGACGCCTCAAGAGGTTGTTGAGAAATAGGGTTTCTGCCCAACAGGCCCGAGAAAGAAAGAAGGTGTATGTGAATGAACTAGAGTCAAAAGCTCAAGAGTTGCAAGACAAGAATTCTAAGTTAGAAGAGCGTATCTCAACTTTGATCAATGAGAACGCAATGCTACGCAAGGTTCTTATGAACACCAGGCCTAAAGTTGATGAGAGCACTGAACCAAAGCAGGATAAGTTAAGTAAAAGCTAA 552 0.4583 MSLPRPTEQQQLKEGVAASSSSSSWNRLNNHTNSFPPSHKRSKIEDSDEDLFTVPDVEATETVQSGGTISNMNVKQSNEKDPQFPAGFQGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELESKAQELQDKNSKLEERISTLINENAMLRKVLMNTRPKVDESTEPKQDKLSKS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1666 183 MobiDBLite consensus disorder prediction 1 37 - -
Glsi06g1666 183 SUPERFAMILY Leucine zipper domain 104 163 IPR046347 GO:0003700|GO:0006355
Glsi06g1666 183 Pfam bZIP transcription factor 101 160 IPR004827 GO:0003700|GO:0006355
Glsi06g1666 183 MobiDBLite consensus disorder prediction 93 107 - -
Glsi06g1666 183 SMART brlzneu 100 164 IPR004827 GO:0003700|GO:0006355
Glsi06g1666 183 CDD bZIP_HY5-like 114 156 - -
Glsi06g1666 183 Coils Coil 116 161 - -
Glsi06g1666 183 MobiDBLite consensus disorder prediction 164 183 - -
Glsi06g1666 183 Gene3D Single helix bin 123 164 - -
Glsi06g1666 183 MobiDBLite consensus disorder prediction 1 107 - -
Glsi06g1666 183 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 107 122 IPR004827 GO:0003700|GO:0006355
Glsi06g1666 183 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 102 165 IPR004827 GO:0003700|GO:0006355
Glsi06g1666 183 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 18 177 IPR044280 GO:0000981|GO:0045944
Glsi06g1666 183 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1666 Glsi-ChrGlsi06 63136159 63139850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1666 90 172 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 75.904 5.01e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi06g1666 bZIP_1 1.6e-12 CL0018