Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1663 ATGGACTTGTGGGCTTCATGGGTTGGTTTCTTTGTGTTTTATAGCTTCTGGACTTCAATTTTCTGTGATCAAGATGGTTTCTTGAGTCTATCTTGTGGGGGAAGAACAAGTTTCAATGATTTATCCAACATTTCATGGATCCCAGACAGCACTTACATAAGCTCAGGCAAGACAACAACTATCGGTTACAATGATGATATCTCCTCATCAAATGTCTCAGCTCGGTTCTTCCCAAATTCCCGAGGTCGATTATGCTACAGGATACCAGTGAACAATGCAACTAGTCTGCTTCTTGTTCGAGCAAAATTTGTATACAAGAACTATGATGGACTTGGAAATCCTCCAACATTCTCTGTTTCTCTTGGGACAGCTATTTCTGCCACAATAAATCTTGCCAAAAATGATCCATGGACAGAAGAGTTTTTATGGACAGTCAACAAGGACACACTGCCATTCTGTTTAATTGCTATCCCAAATGGTGGATCTCCTGTAATTTCTTCCCTTGAAATTCGACCACTTCCTGAAGGAGCCTACACAAGTGGCATGGATGATTTCCCAGATAAGTTACTAAGGAAAAGTTACCGAATCGATTGTGGTCATACCAATGAGTCTATCCAGTACCCTATGGATCCATATGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCAACTGGGTTTAAGGTTCAGCTTAGTTTCAATCAGTCTAGTCTTCTGGAAAAACCACCAGCTGCTGTTCTTCAAACCGGGAGAGTTTTGGCACGGAGAAATGTGCTGACATATAAACTCCCTCTTGATGCATTAGCGGACTACTACATCATTCTCTACTTTGCTGGGATTCTCCCTGTATTCCCCTCATTTGATGTATTCATAAATGGGGATCTTGTGAAGTCAAACTACAAAATAAAATGCTCAGAAATCAGTGCTTTATATGTTACACGAAAGGGAATCAGCAGCTTGAATATAACACTAAAGAGTATCAGCTTTTACCCTCAAATCAATGCATTTGAGGTGTATGAAATGGTTGATATTCCATCAGAAGCTTCTTCAACCACAGTTTCAGCACTACAGGTTATTCAGCAGTCCACTGGCTTGGATCTAGGATGGCAAGATGATCCATGCTCCCCTTCTCCATGGGATCATATTGGGTGTGAAGGAAGCCTTGTCACTTCATTGGATTTCTCTGGTGTGAATTTCAGATCAATTAGTCCAACATTTGGTGATTTGTTGGACCTTAAAAAATTAGATTTGCACAACACATCGTTGGCTGGTGAAATACAGAATTTGGGTAGCTTGCAACATCTTGAGAAATTGAACCTGAGTTTCAATCAGCTAACATCCTTTGGTGACGAGCTGGAGAACTTGGTTAGCCTTCAAATCTTAGACTTGCGAAACAATAGTCTACAGGGACTAGTTCCTGATAACTTGGGAGAGTTAGGAGACCTCCACTTACTGAATCTGGAAAACAACAAACTAGAAGGCCCACTACCAGAGTCTTTGAACAAAGAAACTTTAGAAATCAGAACATCCGGGAATTTGTGCCTTACTTTCTCCGCAAACTGTTACGATGCATCATCCAATCCTTCAATTGAGACGCCACAAGTTACAATAATTCCTAGAAAGAAGCACAATGTACATAGCCATCTAGCAATCATACTAGGCATGGTCGGCGGAGTCACACTTGCCCTTCTCTTGATCTGTCTTTCAGTGTTGCTACACATGACTAAGAAAAGATATGAAGTGTCTCACACAGCAAAAGCAGAAATGGATATAAGAAACTGGGGTGCAGCAAAAGTCTTTTCCTACAAAGAAATCAAAGTGGCTACAGGAAACTTTAAAGAAGTTATAGGACGGGGAAGTTTCGGATCTGTTTACCTTGGAAAGCTTCTAGATGGCAAATCAGTAGCTGTCAAAGTTCGGTTCGACAAAACCCAACTGGGGGCTGATTCTTTCATCAATGAGGTCAATCTTCTGTCAAAAATCCGCCATCAAAATCTTGTATCTTTGGAAGGATTTTGTCATGAATCAAAGCATCAGATATTAGTTTATGAGTACTTGGCCGGTGGATCCCTAGCTTCTCACCTCTATGGCACAAACAGCCAAAAAACTTACTTAAGCTGGGTTCGAAGATTGAAAATTGCGGTTGATGCAGCAAAAGGACTGGACTATTTACATAATGGAAGTGAACCTCGAATTATACACCGCGATGTCAAGTGCAGTAATATCCTGTTGGATATGGAGATGAATGCCAAGGTCTGTGACTTTGGCCTCTCTAAGCAAGTAACTCAGGCGGATGCAACTCATGTCACTACTGTTGTCAAGGGCACTGCTGGCTATCTAGACCCTGAGTACTATTCCACCCAACAGCTGACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAACCATTGAGTCACTCGGGAACTCCTGACTCCTTCAATTTGGTGTTATGGGCCAAGCCTTACTTGCAGGCAGATGCATTTGAAATAGTGGATGAAAGCATAAAAGGAAACTTTGATCCAGACAGCATGAGGAAGACAGCCGTCATTGCTGTGAAATCAGTGGAGAGGGATGCATCACAAAGGCCGTCTATTGCAGAAGTATTAGCAGAACTAGAGGAAGCCTATAGTATTCAGCTCAGGTTCCTTGAATCTCATGAAAATGAGAGTCAAGTTACAAACCTTTAA 2727 0.4136 MDLWASWVGFFVFYSFWTSIFCDQDGFLSLSCGGRTSFNDLSNISWIPDSTYISSGKTTTIGYNDDISSSNVSARFFPNSRGRLCYRIPVNNATSLLLVRAKFVYKNYDGLGNPPTFSVSLGTAISATINLAKNDPWTEEFLWTVNKDTLPFCLIAIPNGGSPVISSLEIRPLPEGAYTSGMDDFPDKLLRKSYRIDCGHTNESIQYPMDPYDRIWDADRSFTPFHVATGFKVQLSFNQSSLLEKPPAAVLQTGRVLARRNVLTYKLPLDALADYYIILYFAGILPVFPSFDVFINGDLVKSNYKIKCSEISALYVTRKGISSLNITLKSISFYPQINAFEVYEMVDIPSEASSTTVSALQVIQQSTGLDLGWQDDPCSPSPWDHIGCEGSLVTSLDFSGVNFRSISPTFGDLLDLKKLDLHNTSLAGEIQNLGSLQHLEKLNLSFNQLTSFGDELENLVSLQILDLRNNSLQGLVPDNLGELGDLHLLNLENNKLEGPLPESLNKETLEIRTSGNLCLTFSANCYDASSNPSIETPQVTIIPRKKHNVHSHLAIILGMVGGVTLALLLICLSVLLHMTKKRYEVSHTAKAEMDIRNWGAAKVFSYKEIKVATGNFKEVIGRGSFGSVYLGKLLDGKSVAVKVRFDKTQLGADSFINEVNLLSKIRHQNLVSLEGFCHESKHQILVYEYLAGGSLASHLYGTNSQKTYLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNAKVCDFGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSHSGTPDSFNLVLWAKPYLQADAFEIVDESIKGNFDPDSMRKTAVIAVKSVERDASQRPSIAEVLAELEEAYSIQLRFLESHENESQVTNL 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1663 908 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Glsi06g1663 908 Pfam Protein tyrosine and serine/threonine kinase 616 884 IPR001245 GO:0004672|GO:0006468
Glsi06g1663 908 Gene3D Transferase(Phosphotransferase) domain 1 690 905 - -
Glsi06g1663 908 SUPERFAMILY Protein kinase-like (PK-like) 597 885 IPR011009 -
Glsi06g1663 908 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 897 - -
Glsi06g1663 908 ProSiteProfiles Protein kinase domain profile. 614 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1663 908 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Glsi06g1663 908 Gene3D Ribonuclease Inhibitor 355 525 IPR032675 -
Glsi06g1663 908 Pfam Malectin-like domain 30 344 IPR024788 -
Glsi06g1663 908 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Glsi06g1663 908 CDD STKc_IRAK 620 887 - -
Glsi06g1663 908 FunFam serine/threonine-protein kinase PBS1-like 582 689 - -
Glsi06g1663 908 PANTHER OS07G0107800 PROTEIN-RELATED 455 889 - -
Glsi06g1663 908 Gene3D - 192 347 - -
Glsi06g1663 908 SUPERFAMILY L domain-like 358 506 - -
Glsi06g1663 908 SMART LRR_typ_2 459 482 IPR003591 -
Glsi06g1663 908 SMART LRR_typ_2 436 458 IPR003591 -
Glsi06g1663 908 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Glsi06g1663 908 SMART serkin_6 614 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1663 908 Gene3D Phosphorylase Kinase; domain 1 585 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1663 Glsi-ChrGlsi06 63055359 63062297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1663 7 898 Receptor kinase-like Gene Family AT5G48740 62.822 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi06g1663 Malectin_like 4.3e-53 CL0202