Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1653 ATGGCTACTCCACCCCTACCTGAACCCTTCTCCCCTGACACCACCGCCAACTCCGTCGCCTCACCCACCAAGAAACCCCAATCAATCCCATGGACCCATCAAGAAACGGTCAACCTCATCCAAGCCTACCAAGAGAAATGGTACTCTCTCAAGCGAGGTCAGCTCAGGGCCAACCAGTGGGAAGAGGTGGCTGTCACCGTCGCCGCTCGCTGTGGTTATGACTACAACGAACCTTCCAAGACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAACGGTATCGTGCTGAGAACCAGCGTCTTGCTTCTTCCGGTGGGGGCGGTCGTGCTTGGCAATACTTTGACCTCATGGACCGATTGGAAAAAGGCCCTTTGCCTATTTCTGCTCGACCACTTGTAGCTTTTATGCCCTTTAATTATGATAATGAGGATGAAGATGGAGATGAAGAGGACGAAGAGGAAGAAGATGAGGAAAAGGAGTCCTATAGCAAGTCAAGGAGTATTAATTACATTCTAAACCAGCGACCCAGAACTAAATATGGAGGAGTTTCCGAGTTTTCCAGGGAGCAGGTAGCAAAGAGGCTATGGAGAGTGTCAGCAGATGAGGAGGAGGAGGAGGAGGACGATGATGTTGAGGAAGTGGATAGGGAAAGAATGGTGAATAGAATGGGAGTAGTTTCTGGGTTGGCAGCAGAGATGAAGGCTTTTGCGGAAAGGTTTATTGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACTGAGAGGTGCAGGCTGGAGATGGAGAATAAGCGAATTCAGATGATTATCAAATCGCATCAGAGAATTGTTGATTCAATTGGGAAGGCTTTTGGGCATCCAAAGAGGATGAAGATAAGGCATGAGTTCTAA 897 0.4916 MATPPLPEPFSPDTTANSVASPTKKPQSIPWTHQETVNLIQAYQEKWYSLKRGQLRANQWEEVAVTVAARCGYDYNEPSKTAVQCRHKMEKLRQRYRAENQRLASSGGGGRAWQYFDLMDRLEKGPLPISARPLVAFMPFNYDNEDEDGDEEDEEEEDEEKESYSKSRSINYILNQRPRTKYGGVSEFSREQVAKRLWRVSADEEEEEEDDDVEEVDRERMVNRMGVVSGLAAEMKAFAERFIGMENLKMEMMKETERCRLEMENKRIQMIIKSHQRIVDSIGKAFGHPKRMKIRHEF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1653 298 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 22 282 IPR044823 -
Glsi06g1653 298 MobiDBLite consensus disorder prediction 141 169 - -
Glsi06g1653 298 MobiDBLite consensus disorder prediction 143 160 - -
Glsi06g1653 298 MobiDBLite consensus disorder prediction 12 30 - -
Glsi06g1653 298 Coils Coil 82 102 - -
Glsi06g1653 298 SMART 118neu2 38 127 IPR006578 -
Glsi06g1653 298 ProSiteProfiles Myb-like domain profile. 30 93 IPR001005 -
Glsi06g1653 298 Pfam Myb/SANT-like DNA-binding domain 30 122 IPR044822 -
Glsi06g1653 298 Gene3D - 31 98 - -
Glsi06g1653 298 FunFam Trihelix transcription factor ASIL2 31 98 - -
Glsi06g1653 298 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1653 Glsi-ChrGlsi06 62877370 62878266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1653 31 122 Trihelix Transcription Factor Family AT3G14180 38.043 8.83e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi06g1653 Myb_DNA-bind_4 2.2e-20 CL0123