Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1615 ATGAGATTAGAGAAATGCTGGTTCTGTTCTTCAACCGTATACCCTGGGCATGGAATCCAGTTTGTTCGTAATGACGCAAAGATTTTTAGGTTTTGTAGATCTAAATGCCACAAAAACTTCAAAATGAAGAGAAATCCTAGGAAAGTAAAATGGACCAAGGCATATCGCAGATTGAATGGAAAGGATATGACACAGGATTCAACCTTTGAATTTGAGAGAAAACGTAACAGGCCAGAGAGATATGATAGAAATCTTGCAGAGAATGTCCTCAAGGCCATTCCAAAGATTGATAAGATTAGAACCACTAGAGAGGAGAAGCACCATAAGGATAGGATGAAAGACAAGAAACACAAGGAAAGGAGAGAAGCTGTAAAGGAGTTGGAGCAAGGTATCAGTTTGGTCAAAGCTCCTTCTGTGCTTCAACAGGACCAGTCTCTCACTTTACCAAAGATCAAGGTCAAGGTTTCTCCACCGCAATTAGAAGAAAATCATGCCATGGAAGAGTGA 507 0.4024 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLNGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRTTREEKHHKDRMKDKKHKERREAVKELEQGISLVKAPSVLQQDQSLTLPKIKVKVSPPQLEENHAMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1615 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Glsi06g1615 168 SMART 4TRASH 6 44 IPR011017 -
Glsi06g1615 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Glsi06g1615 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Glsi06g1615 168 MobiDBLite consensus disorder prediction 99 124 - -
Glsi06g1615 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Glsi06g1615 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Glsi06g1615 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Glsi06g1615 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 167 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1615 Glsi-ChrGlsi06 61942592 61943811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1615 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 67.857 1.34e-79 231