Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1611 ATGGTTAGAGAGCAAAGGGTAGAGTCGTTCTACACTAGACTACGTGAATCGGCAATAGCTTCGTCGTCTTCCCCCTTGCTCATATTTCCGTCGACGTCTGACGTAGATTCACTCTGTGCATTGAAAATCATATTTCATGTTCTCGAGTCTGATTCGGTCCGATATGCGTGTTATCCTGTGTCGTCGTTTCATGAAATTCACAAATACGCCGGAACCAGTTTGAGTTCGTCTGATGAGCCTGTTTCGATCCTTTTAATAAATTGGGGGTGCCACCGGGACCTGAGGAGAATTTTAAATCTGGGTCCTGCTGCTCGTGTTTTTGTGGTTGATAGTCACCGTCCTATTCATCTTCACAATTTGAGCGATGAGAATGATAGGGTGGTGGTGCTTTATACAAAGGATGATGAGCAGCAGGCTGATTTAGCCTATGATTTTGATGTGTCGGCTTTGGCTAATGCTAGTGATTTGAATTGTGACGACGAGGCTGAACAGGAATCTGACAGCGATGATGACAATGACAGTGAAAGTGAAGAAGAGGGAGATCGGGATGGATCCAGGAAGCGGCGGAGAGTTTCTCAAGATAATGAACAAGACCCAGTTCAGCTTTTCCAAAAGCTGAAAAAGGAGTATTATCATATGGGCACATTTCATGGTAAACCATCTGGTTGCTTGATGTATGATTTATCCCATTTTCTGCGGAAGAACACAAATGAACTGCTATGGCTCTCTTGTGTCTCTTTAACGGATCAGTTTATTCATGAGAGATTAAGTGATGAGCGATACAAAGATGGGGTTATGGAGCTTGAGCAGCATATTAACAGTTCAGGGAATTTGGATGCGGTAACTTCCGTAACACTCAAGGATGGAACAAAGATCCGGGCGCCGAATTCAACTAGAATTGCATATGAAGAAGAACCAAGGCTTATGTTGCTGAAAGAGTGGAATCTGTTCGATTCAATGTTGTGTTCTGCATATATTGCGACTAAATTGAAGACATGGAGTGACAATGGGATGAAAAAGCTGAAGCTTCTTCTAGCCCGGATGGGATTTGCACTTGCCGATTGCCAACAGAAGTTTCAGTACATGAATGTAGAAGTCAAACGCAAAATGAAACATGAGTTTGACCGTTTTCTACCTGAATATGGGCTTACTGATTTCTACTATAGGAGTTTCTTACGAATACATGGCTATAATTCAAGGGTGTCTGCTGCAGATATGGTATATGGCGTGACCGCTCTGCTTGAATCATTTGTAAAATCAGATGGCTCATGTGCTTCCAAGCAATTTGGGGTAGCTTATGACGCACTGTCCTTGAACAATCTTGATAAGCTGAAATCTGGAATGCAGAATGCAATCAAGATTCAAAGGGCCATTCTTAGACAAGGTAGCACAGCAATAACCAAGAGTGGCTGTATAAGAAGTGGAAGGAAATTCAGGTGGGTTAAACTTGAAGATTCTGCTGACACAAAATTACTGGGTTACCCCCAGGCTTTGACTAAATTCTGTTATTTTCTTATGGATGCTTTGCGAGAGAAAGGAGCGAGGATGAAACCTCTGCTTTGTGCTTGTTTATCACAAGAACCCAATAAAGTATTGATTGTAAGTGTTTGTGGGAGGCCTCGTCTGGGTGCAGGTAAAGGCAATGCATTTGGAATTGCATTTAGAAATGCTGCTGAGGAGATTGGAGCAGACTTCTTCCATGAATTGTTTGAATCTTCATGGATTGTTTTAGACGCAACAGCGGTAAATTCCTTCATGGTCAGGTTGACTGAGAGGTTATGA 1782 0.4248 MVREQRVESFYTRLRESAIASSSSPLLIFPSTSDVDSLCALKIIFHVLESDSVRYACYPVSSFHEIHKYAGTSLSSSDEPVSILLINWGCHRDLRRILNLGPAARVFVVDSHRPIHLHNLSDENDRVVVLYTKDDEQQADLAYDFDVSALANASDLNCDDEAEQESDSDDDNDSESEEEGDRDGSRKRRRVSQDNEQDPVQLFQKLKKEYYHMGTFHGKPSGCLMYDLSHFLRKNTNELLWLSCVSLTDQFIHERLSDERYKDGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPNSTRIAYEEEPRLMLLKEWNLFDSMLCSAYIATKLKTWSDNGMKKLKLLLARMGFALADCQQKFQYMNVEVKRKMKHEFDRFLPEYGLTDFYYRSFLRIHGYNSRVSAADMVYGVTALLESFVKSDGSCASKQFGVAYDALSLNNLDKLKSGMQNAIKIQRAILRQGSTAITKSGCIRSGRKFRWVKLEDSADTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPNKVLIVSVCGRPRLGAGKGNAFGIAFRNAAEEIGADFFHELFESSWIVLDATAVNSFMVRLTERL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1611 593 MobiDBLite consensus disorder prediction 179 199 - -
Glsi06g1611 593 PANTHER CDC45-RELATED PROTEIN 1 592 IPR003874 GO:0006270
Glsi06g1611 593 MobiDBLite consensus disorder prediction 158 178 - -
Glsi06g1611 593 MobiDBLite consensus disorder prediction 157 199 - -
Glsi06g1611 593 Pfam CDC45-like protein 421 591 IPR003874 GO:0006270
Glsi06g1611 593 Pfam CDC45-like protein 27 417 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1611 Glsi-ChrGlsi06 61876567 61878348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1611 1 593 Core DNA Replication Machinery Family AT3G25100 75.042 0.0 922