Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1609 ATGACTTTTACTATTGACATCAAGGATGACTCAAGAGGTCGACCTATCAAAAAATCCAAGGTCAAGACGCTAGAGAAGGAAGTAACCATGAGAGCAGCCAGGAAACACGAACAGGTAATCGGCGATAGCAGCCAAAATAACAGCACTGACCGAGTCCGAACTGTAAAGAAGGAACGGGTAAGGGGTGGCCGAGTCAACACTGCTGATCATGAATCAACTCAAGAGAATGAGCAGGATCCAGCAAGTCGGAGGGTGATTCGGTCTCAGTATTTAGCACTCATAAATTTAATTAATGAGAAAAGGGATGATTTGGTGCAAACAGATTCCGACAAGTTCAATACCATCATGAATGAAGTAGAGAAGTTACACGAGCAAGTTCAGAAGCCAAGAGAGCAAGTTGCAGATGCTGAGGCACTGCTTGACTTGGCTACCACTTTGGTTGGGTCTGTTAAGTCTCTGCTTAATGAAGGTGTGACCCCTTCAGAATTTGTTAGTTGTTTGCTCAATGAGTTTGGGCAATCCAGTAGGAGTATAAGCAGCGAAGAGGGTGCCCAAAACTCAATTAACTGGAAAGAAATTGGACTAGCTGTATCACCGATTTTCATGAATATTCATGGCTGTTGGACCATGCTCGGTCCAATGGAAAATGAGTTGAAGCAACGGAAGGTAGCAGCTGGGCACAGAAAGCGTGCAAAGCCAACTGCAAGGGCTAGGCCTGAAGAGCTTGATGATACAATGGTAGAGGAAAACACAGATACTGATAAGAATATGGCAACCATGTTTGAGATCTTGAGGAGGAAGAAACGTGTCCGACTAGAAAGCCTAATGTTGAACAGAAAATCTTTTGCGCAAACAGTGGAAAACTTGTTTGCTCTATCATTCTTAGTTAAAGATGGTCGTGCTGAAATAACTTTGGATGAAAATGGTTCTCACTATGTTTCACCAAGAAATGCTCCAACATCCAATTCAGTTATGTCAAAAGAAGTTTCTATCAGTCATTTTATGTTCAGATATGATTACCAAGATTGGAAGTTAATGAAGGACATGTTGCCTGATGGAGAGGAGTTAATGCCACATAGGAATCAGTTTTGCCCGGTGGTTGACACTCAAGAAGAGACTGCTGCTTGCAATTCCCAAGCAGTATTGGCAGCAACACCAATCAGGAAGCTGACCCGGAACCGAGGGCTGGTTGTGCAGGAGGAAGGTGTTGTTGAAGAATCTCCTGAATGTGATGAGGAAAATGCTACCAGACCTGCTGCAATTCGTAGGTGTAAGCGTAAGCTTAATTAA 1290 0.4333 MTFTIDIKDDSRGRPIKKSKVKTLEKEVTMRAARKHEQVIGDSSQNNSTDRVRTVKKERVRGGRVNTADHESTQENEQDPASRRVIRSQYLALINLINEKRDDLVQTDSDKFNTIMNEVEKLHEQVQKPREQVADAEALLDLATTLVGSVKSLLNEGVTPSEFVSCLLNEFGQSSRSISSEEGAQNSINWKEIGLAVSPIFMNIHGCWTMLGPMENELKQRKVAAGHRKRAKPTARARPEELDDTMVEENTDTDKNMATMFEILRRKKRVRLESLMLNRKSFAQTVENLFALSFLVKDGRAEITLDENGSHYVSPRNAPTSNSVMSKEVSISHFMFRYDYQDWKLMKDMLPDGEELMPHRNQFCPVVDTQEETAACNSQAVLAATPIRKLTRNRGLVVQEEGVVEESPECDEENATRPAAIRRCKRKLN 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1609 429 MobiDBLite consensus disorder prediction 51 82 - -
Glsi06g1609 429 Pfam Nse4 C-terminal 270 355 IPR014854 -
Glsi06g1609 429 PANTHER UNCHARACTERIZED 44 413 IPR027786 GO:0005634|GO:0006281|GO:0030915
Glsi06g1609 429 MobiDBLite consensus disorder prediction 223 242 - -
Glsi06g1609 429 MobiDBLite consensus disorder prediction 25 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1609 Glsi-ChrGlsi06 61845497 61851902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1609 34 428 Non-SMC Element family AT1G51130 52.500 5.21e-138 399