Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1595 ATGCCGACATGCAGACTCGATCACTCCAGCTACCATGTAAACCAACTTCGCGATCTCATATCAGAAGCAGTATTTCAAATATCTCAATCTCTTAAAATATTCACACTCTTCACCTTCTGTCCTTCAACCCAACAACTCCTTAATTTTGCTGCCATGTCATTGCCATTTTGGTCCAAACACCTTCTTGCCATACTTGTCGTCTATGTAAACTTGCTTTGGCTGCCACCTACCAGAGCTGCATCTGCATTAGAAAACGAGACTGATTATTTGGAATTGCTCAAGTTTAAAGAATCAATATCCAATGACCCATATGAAATCTTGAGCTCTTGGAATAGTTCAAACCACTTCTGCAGCTGGCATGGAATCACATGCAGCCGCCAGCATCAAAGAGTGACTGAGTTGAAGTTGCAAGGATATCGATTGCGTGGGATCATATCACCCCATGTTGGCAACCTCTCCTTCCTGAGAAACCTCTACCTTCAGAACAACAGCTTCCATGGAGAAATCCCACCAGAGTTGGGTCGTTTGTTCAGACTGCAGCAACTCTCTCTGAAGGATAACACAATGACAGGGGAGATTCCTATCAACTTGACAGGTTGCTCTGAACTCAGGCAGTTAAATTTGTCAATCAATAGTTTTACTGGCAAAATACCATCTGAGCTTGGCTCTCTTAGGAAGCTTGAAATGTTGTACCTTGCTACAAACAATTTAACTGGAGAAATCCCACCTTCCATATGGAATCTTTCTTCCCTTGATCTTCTATCCATTGGTTATAACAACTTGGAGGGGAGAATACCAGAAGAAATACACCTTCTGAAGAACTTGAGAATTTTATCAATAGCTGGGAACAAATTGTCTGGCAGGCTTCCTTCTTCACTTTACAATATGTCATCCTTCACTTACTTATCATTAGCAGATAATCAGCTAAATGATACTCGACTTCCAGACAACATGTTCTCCACCCTCTTTAATTTGCAAGATTTTGGTATAGGTGGGAATCAGATTTCAGGTTCAATCCCAACTTCCATCACAAATGCATCTTTTCTTCAATTATTTGATATTGGTGTAAACTATTTTGTTGGAAAAGTTCCAAATCTAGGAAACCTACAAGATCTTCAGTGGCTAAATCTGAACTATAATAATCTGGGCAGCAGTTCAAATGATGACCTGGATTTTATAACATCTCTGGAAAACTGTAGCAAACTGGAAAACTTGATTCTATCTACCAACAAATTTGGAGGTCTGTTACCCGGCTCTATAGGCAATTTGTCGACCCGACTCATTCGACTTTACTTTGGTGATAATCAGATACATGGAATTATTCCTGCAACTTTAGGAAGGTACACAAATTTAATTGCCTTGGTTATTGAACAAAACCAGTTTACAGGCACCGTTCCAACTTCTTTTGGGAAGTTTCAAAAGCTGCAAATACTGGGATTAGGGAGAAACCAGCTCTCAGGAAAGATACCAGCCTCCTTAGGCAACCTGAGCCAATTGGTTAAATTAAGCCTTTCAGAGAATATGCTTGAAGGAAAAATTCCAGCCAGTGTTGGAAATTGGAAAATTTTGGAGCTTCTAGACCTTTCAGAAAACAATATTAGTGGAGCTATTCCCTTGCAGGTTTTTAGTCTTTCCTCCTTGTCCACCTTACTGAACTTATCTCACAACTCATTGAATGGCTCTCTGCCTACTGAGGTGGGAACCCTTAAAAACCTTGTCACTTTGGATATCTCTGAAAACTATCTTTCTGGGGAGATTCCTGGGACCATTGGAGAGTGCTCAGGTATGGAAAACCTTAACTTACAGGGAAATTTGATCAGTGGAACCATGCCTTCATCACTATCTTCGTTGAAAGGCCTTAAGCATTTAGATCTATCACGAAACAACTTGTCTGGATCAATTCCAACAGGTTTACAGAACATTTCTGTCCTTGTATACTTGAATGTTTCTTCTAATTTGTTGGATGGTGAGGTACCAACAGGAGGGGTTTTCAGAAATGCAAATGCAATATTTGTGGCAGGTAATAAATTTTGTGGGGGTATCTCCAAGCTGCATCTCCCACCATGCCCTAACAAAGTTGTGACGCAAAGTAAACGTCATAAATTGAAGCTCATAGTAATTCTAATTTCTGTGGTTGCTTGTCTTCTGTTGTCATCTTTTCTTGCTATCTATTGGAGGAGGAAAAGAAGTATAAAATCATCTTCCACTTCATCAACAATTGACCAGCTTTCTAGGGTGTCATACCAGACCCTACACACTGTAACAGAAGGATTCTCAACCAACAATTTGATAGGATCTGGGAGTTTTGGCTCTGTGTATAAAGGGAGGTTACAATCAGAAGACAAATTTGTTGCTATAAAGGTCCTAAACCTTCAAAAGAAGGGAGCTCATAAGAGTTTCATTTCTGAATGTGACGCTCTTAAAATTATTAGACATCGAAATCTGGTTAAGATTTTAACATGTTGCTCGAGCATAGATTATAAAGGCCAAGAATTCAAAGCACTAGTCTTTGAGTACATGTCAAATGGAAGCCTAGAAAATTGGTTGCATCCTGGTACAGAAAGTGCAGACCAGCCTCAAACTTTGGATCTTAGTCAAAGATTGAATATTCTAGTCGACATTGCTTCTGCATTGCATTATCTTCACTCTGAATGTGAGCAACCTATTGTGCACTGTGATTTAAAGCCAAGCAATGTGCTTCTTGATGATGATATGGTTGCTCATGTGAGTGATTTTGGCCTAGCAAGACTTCTCTCCACCCTTAATGGCAGCTCTCAGAAGCAAAGCAGCACAATTGGAATAAAAGGGACTATTGGCTATGCTCCTCCGGAGTATGGAATGGGTTCTGAGGTATCAACACAGGGTGACGTATATTCTTTTGGGATTCTAATTTTGGAAATGCTAACTGGAAAAAGACCCACGGAAGAAATGTTCAAAGATGGTCACAATCTCCATAGCTATGTGAAAACTGCATATCCAAGTAACTTTTTGGAGATTGTGGACTTAGCCGTTCTACCAAAACAAATAAAACAGACAGCAACAGCAGCATCAGTAGAAATCAACATGGAGAAGCCGAGCCTTGTGCATCCTAATGAAGAGAAGTCTATATTTTCACTATTTAGCATTGGACTTGCTTGTTCAGTAGATTCACCAAAAGAAAGATTGAAAATGATGGATGTCACAAGGGAGCTAAATCTGATTAGAAATGGTTTTCGTTTTGGCTAA 3225 0.3978 MPTCRLDHSSYHVNQLRDLISEAVFQISQSLKIFTLFTFCPSTQQLLNFAAMSLPFWSKHLLAILVVYVNLLWLPPTRAASALENETDYLELLKFKESISNDPYEILSSWNSSNHFCSWHGITCSRQHQRVTELKLQGYRLRGIISPHVGNLSFLRNLYLQNNSFHGEIPPELGRLFRLQQLSLKDNTMTGEIPINLTGCSELRQLNLSINSFTGKIPSELGSLRKLEMLYLATNNLTGEIPPSIWNLSSLDLLSIGYNNLEGRIPEEIHLLKNLRILSIAGNKLSGRLPSSLYNMSSFTYLSLADNQLNDTRLPDNMFSTLFNLQDFGIGGNQISGSIPTSITNASFLQLFDIGVNYFVGKVPNLGNLQDLQWLNLNYNNLGSSSNDDLDFITSLENCSKLENLILSTNKFGGLLPGSIGNLSTRLIRLYFGDNQIHGIIPATLGRYTNLIALVIEQNQFTGTVPTSFGKFQKLQILGLGRNQLSGKIPASLGNLSQLVKLSLSENMLEGKIPASVGNWKILELLDLSENNISGAIPLQVFSLSSLSTLLNLSHNSLNGSLPTEVGTLKNLVTLDISENYLSGEIPGTIGECSGMENLNLQGNLISGTMPSSLSSLKGLKHLDLSRNNLSGSIPTGLQNISVLVYLNVSSNLLDGEVPTGGVFRNANAIFVAGNKFCGGISKLHLPPCPNKVVTQSKRHKLKLIVILISVVACLLLSSFLAIYWRRKRSIKSSSTSSTIDQLSRVSYQTLHTVTEGFSTNNLIGSGSFGSVYKGRLQSEDKFVAIKVLNLQKKGAHKSFISECDALKIIRHRNLVKILTCCSSIDYKGQEFKALVFEYMSNGSLENWLHPGTESADQPQTLDLSQRLNILVDIASALHYLHSECEQPIVHCDLKPSNVLLDDDMVAHVSDFGLARLLSTLNGSSQKQSSTIGIKGTIGYAPPEYGMGSEVSTQGDVYSFGILILEMLTGKRPTEEMFKDGHNLHSYVKTAYPSNFLEIVDLAVLPKQIKQTATAASVEINMEKPSLVHPNEEKSIFSLFSIGLACSVDSPKERLKMMDVTRELNLIRNGFRFG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1595 1074 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 87 195 - -
Glsi06g1595 1074 ProSitePatterns Protein kinases ATP-binding region signature. 764 787 IPR017441 GO:0005524
Glsi06g1595 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 889 901 IPR008271 GO:0004672|GO:0006468
Glsi06g1595 1074 SUPERFAMILY L domain-like 86 382 - -
Glsi06g1595 1074 Gene3D Ribonuclease Inhibitor 89 199 IPR032675 -
Glsi06g1595 1074 Gene3D Ribonuclease Inhibitor 200 267 IPR032675 -
Glsi06g1595 1074 SMART serkin_6 758 1067 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1595 1074 SMART LRR_sd22_2 272 298 - -
Glsi06g1595 1074 SMART LRR_sd22_2 224 250 - -
Glsi06g1595 1074 SMART LRR_sd22_2 569 601 - -
Glsi06g1595 1074 SMART LRR_sd22_2 424 445 - -
Glsi06g1595 1074 SMART LRR_sd22_2 617 643 - -
Glsi06g1595 1074 SMART LRR_sd22_2 472 498 - -
Glsi06g1595 1074 Pfam Leucine rich repeat 596 654 IPR001611 GO:0005515
Glsi06g1595 1074 Pfam Leucine rich repeat 450 509 IPR001611 GO:0005515
Glsi06g1595 1074 CDD STKc_IRAK 764 1067 - -
Glsi06g1595 1074 Pfam Protein kinase domain 759 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1595 1074 Gene3D Transferase(Phosphotransferase) domain 1 840 1071 - -
Glsi06g1595 1074 Pfam Leucine rich repeat N-terminal domain 86 125 IPR013210 -
Glsi06g1595 1074 SUPERFAMILY L domain-like 425 682 - -
Glsi06g1595 1074 FunFam LRR receptor-like serine/threonine-protein kinase EFR 388 695 - -
Glsi06g1595 1074 Gene3D Phosphorylase Kinase; domain 1 729 839 - -
Glsi06g1595 1074 SMART LRR_typ_2 369 392 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 224 248 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 152 176 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 544 569 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 617 640 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 496 520 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 272 295 IPR003591 -
Glsi06g1595 1074 SMART LRR_typ_2 296 321 IPR003591 -
Glsi06g1595 1074 PANTHER OS04G0122200 PROTEIN 157 269 - -
Glsi06g1595 1074 SUPERFAMILY Protein kinase-like (PK-like) 731 1064 IPR011009 -
Glsi06g1595 1074 FunFam LRR receptor-like serine/threonine-protein kinase EFR 729 839 - -
Glsi06g1595 1074 ProSiteProfiles Protein kinase domain profile. 758 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1595 1074 Gene3D Ribonuclease Inhibitor 394 691 IPR032675 -
Glsi06g1595 1074 Gene3D Ribonuclease Inhibitor 268 393 IPR032675 -
Glsi06g1595 1074 FunFam Leucine-rich repeat receptor protein kinase EMS1 196 292 - -
Glsi06g1595 1074 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 840 1073 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1595 Glsi-ChrGlsi06 61582107 61585801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1595 82 1071 Receptor kinase-like Gene Family AT3G47570 46.660 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi06g1595 Pkinase 2.2e-43 CL0016