Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1580 ATGGATTCTCTTTCTTACCCAATAACAGCAATTTTAGCTTTAGTTGTTTCACTGCTTCTCTACAACCTATGGAGGATGAAAAACTCACATCACAGAACAAAAGGTATGCTAGCACCAGAACCATCAGGTGCCTTGCCCTTGATAGGTCATCTCCATCTATTGGGAGGAAAAGCCCCACTTGCCCGTACCTTAGCTGCTTTGGCCGATAAGTATGGCCCCATCTTCACAATCCGTCTTGGAGCATACCCTGCCCTTGTGATTAGCAACCAAGAGGCAATAAAGGAGTGCTTCACCACCAATGACAAAATCTTAGCCACGCGCCCAAAATCTAGCCATGGAGTTTACCTTGGTTACAACTTCGCAGGATTTGGGTTTGCACCAGATGGCACATATTGGCGAAAACTGAGAAAGCTAGTCATGCTTGAACTGCTATCTACTCGCAGGCTTGAGTCACTGAAGCATGTATACGAATCTGAGACCAATACTTTTATCAGTGATTTGTATCTGTATCTTGGTGGTAACGCACCAGTTAAGGTTGTGATCAGTGAGTGGCTGGAACGCCTAACTTTTAATATAATTACGAAGATGATTGCAGGCAAGAGATATTTTGGGAACTTGCAAGATGTGGATGATGAAGAGGCACACCGTATTGTGAAACTAATAAAAGAATTTATGCACATTTCTGGGGAGTTTGTTCCTTCGGATTTGATCCCATTTCTTGGTTGGTTTAATCTTCAAGGCCAAGTGCTGAAATCCATGAAGAGAATAGCAAAAGATTTAGATTCCCTTGTAGCAAGTTGGGTTGAAGAGCATACTATGAAGAGGCAGGGGAATGATTCAAGTGAGAATCAGGATTTCATCGATGTCATGCTCTCTGTTATTGAAGAGGATTCAAACCTGGGTCACACTCGTGACAATATCATCAAGGCAAACATTTTGAATCTGATCTTAGCTGGGGCAGACACGACATCGATCAACATGACATGGATCCTAGCCTTATTGTTGAATAACAGGCGTGCTTTGAAGCGTGCCCAAGAGGAGATTGATCATCAAGTGGGCAAGGAAAGATGGGTGGAAACTTCTGATATCAGAAATTTGGTTTATCTGCAAGCCATAGCCAAGGAAACTCTGCGATTGTACCCACCAGGGCCTCTATTGGTACCCCATGAAGCAACCCAAGATTGCTATGTTTGCGACTATTTTGTACCAAAAGGTACCAGAGTATTTGCCAATGTGTGGAAACTGCATAGAGACCCAAATATTTGGTCTCAGCCTGAAAGCTTCTTACCTGAGAGGTTCATAACAGACACTGGAGACATTGATGAAGGTCACCATTTTGAGTACCTTCCCTTTGGGTCTGGGAGAAGAGCATGCCCTGGATCTACCTTTGCGGTGCAAGTGAGTCTCTTAACTCTTGCTCGCCTGCTTCAAGGGTTTGAACTAGAGGTTCCAATAATGGATGAGCCTGTAATAGACATGAGAGAAGGCATGGGCATAACCTTGCCCAAGGCAACCCCATTAGAAGTTCTTCTTACCCCACGACTTCCCTCTCAACGCTACCATAGAAATGATCATATGCAGTAA 1584 0.4388 MDSLSYPITAILALVVSLLLYNLWRMKNSHHRTKGMLAPEPSGALPLIGHLHLLGGKAPLARTLAALADKYGPIFTIRLGAYPALVISNQEAIKECFTTNDKILATRPKSSHGVYLGYNFAGFGFAPDGTYWRKLRKLVMLELLSTRRLESLKHVYESETNTFISDLYLYLGGNAPVKVVISEWLERLTFNIITKMIAGKRYFGNLQDVDDEEAHRIVKLIKEFMHISGEFVPSDLIPFLGWFNLQGQVLKSMKRIAKDLDSLVASWVEEHTMKRQGNDSSENQDFIDVMLSVIEEDSNLGHTRDNIIKANILNLILAGADTTSINMTWILALLLNNRRALKRAQEEIDHQVGKERWVETSDIRNLVYLQAIAKETLRLYPPGPLLVPHEATQDCYVCDYFVPKGTRVFANVWKLHRDPNIWSQPESFLPERFITDTGDIDEGHHFEYLPFGSGRRACPGSTFAVQVSLLTLARLLQGFELEVPIMDEPVIDMREGMGITLPKATPLEVLLTPRLPSQRYHRNDHMQ 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1580 527 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 FunFam Cytochrome P450 82C4 28 512 - -
Glsi06g1580 527 Gene3D Cytochrome P450 27 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Glsi06g1580 527 SUPERFAMILY Cytochrome P450 39 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 Pfam Cytochrome P450 39 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1580 527 PANTHER CYTOCHROME P450 82C3-RELATED 15 520 - -
Glsi06g1580 527 CDD CYP82 72 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1580 Glsi-ChrGlsi06 61257370 61261195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1580 9 520 Cytochrome P450 AT4G31940 49.427 1.51e-173 498