Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1565 ATGGCCACCAAAGGTAAAATCTTTTTGGTTATGGAGTATGTCAAAGGTGGGGAATTGTTCGCCAAAGTCAACAAGGGGAAGCTGAAGGAAGATGTGGCCAGAAAATATTTTCAGCAATTGATCAGCGCCGTCGACTTCTGCCACAGCCGAGGAGTCACTCACCGTGACTTGAAACCTGAAAATTTATTCTTTGACGAAAATGAAGATCTCAAAGTCTCTAACTTTGGGTTATCGGCTTTGTCAGAGCAACGACGATCCGACGTAATGCTGGTTACGCTATGTGGGACGCTGGCTTATGTGGCACCAGAGGTGTTGAAGAAGGAAGTCACTTATATTCTCTTCATTGACTCCGTTGAGTCTCCCTCTGTTAACTATGATGATGATGGGGCATCACTCTTGGCAGATACGGCGGCGGATGGTATACGCATCTTATCGTCAATATTGCCCTGCCTTGACGTGAAATCTCAGTTGACCTTCTTGTATCAACCAACACTCGTTGACTTTGGCTCCTTCAACGTTGAGGTGTGGCAAAAAGAGATTCCTTTTCTCTTTTTCCTTCTAGTTTCTGTCCTATTTCATTGTTGGCTTATCCCAAATGCTGAAACTACTCGAAGTGAAGATTCTTGTTTGGAGGGGGACTTATCTTTAGTTTCTTCTGACTCCCCAGCTTTTCTCAGGGATAATTTGGGTGGGAAGGTTGAAGATGGTACGGTGAATGGGGAAAATGAATTGGTATTTATACAAAGTGGTGAAAGGAGTAGCGGGCCTTCTTCTGGTTTGGATTTGGAAGTCAATAGCAGGAGAAGACAAAATGTCTACAGGGAAATATTGCACAAGTATGACGAATTGAGGATTCCTAGCAAGAATTTGAAAGAGGAAAAAGAAAAAATCTTGAGCTATTGCCCAGGAGCATGGACTGAGAAGGTGGGCGGTTTGAAATTAAGTGATTATGATGTACCAAAGACAACATGCCTCATATTGATTGGTCCAAGAGGGTCAGGGAAAAGTAGTCTCATAAACAGAATCTCCAAGGTTTTTGAGGATGACAAATTTGCACCTGTGAGAGCACAAGTATCATATAATTCACCTATAGGTGGTGGGACATACTTCCTCCAGGAGTATATGATTCCGAGAGACTCGACTTCCTTTTGTCTCTATGATACGTGTGGTTTGTCTGGTAATTCAAATGATGATGATAGAATCCTAAATCGTTGGATGACAAATGGTGTTCATCATGGGGAGATTGTTGTCAGGAATACAGATAATCAGAGTTTGAAGGAAATTTTGGAGCATAAAGCTCACAGGACTGGTTACTTTTCCAGTAACACGAGAAAAGTTAACTTTGTTATATATGTTGTCAATGGTCTTTCTGTTCTGAAAGCAATGGAGAATAACGATGCTTTGGAGGCACAGTATACTAATACAATTGCTTCTACTTTCAATTGCTCATACCTTTCATTTAAAGATGACAAACCTGTACTTGTTGTCACACATGGGGATCTTCTTTCACTTTTTGATCGTGCTCGTGTTTGTGCACATTTGGTAGAGCTGCTAGGAATTCCACCAACACAAATTTTTGACATCCCTGAGTTTAACAAACCAGTGACTGAGTTTACCATAATTGAAATGTTGCGATATACACTTGCGCATGCTGACAGAAACTATCCTCAGAAAAACATGGTCAGGGACAAGGTTCATAAAGCATCTCTATCACTCTGTATGATTGTGCTGATCCTAGGACTAGGAATCGCCATCGCTTTAGTCCATAGTAAGTTCATGCATCCCTGTCAATGTCATGCCAGGAAAATTCATGCATCTGGTGCAGAACTCGAGGTTCCTCAAATGCAACCCAAGATAGATTGGTACAAAATTCGGCACATATGGTAG 1887 0.416 MATKGKIFLVMEYVKGGELFAKVNKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLFFDENEDLKVSNFGLSALSEQRRSDVMLVTLCGTLAYVAPEVLKKEVTYILFIDSVESPSVNYDDDGASLLADTAADGIRILSSILPCLDVKSQLTFLYQPTLVDFGSFNVEVWQKEIPFLFFLLVSVLFHCWLIPNAETTRSEDSCLEGDLSLVSSDSPAFLRDNLGGKVEDGTVNGENELVFIQSGERSSGPSSGLDLEVNSRRRQNVYREILHKYDELRIPSKNLKEEKEKILSYCPGAWTEKVGGLKLSDYDVPKTTCLILIGPRGSGKSSLINRISKVFEDDKFAPVRAQVSYNSPIGGGTYFLQEYMIPRDSTSFCLYDTCGLSGNSNDDDRILNRWMTNGVHHGEIVVRNTDNQSLKEILEHKAHRTGYFSSNTRKVNFVIYVVNGLSVLKAMENNDALEAQYTNTIASTFNCSYLSFKDDKPVLVVTHGDLLSLFDRARVCAHLVELLGIPPTQIFDIPEFNKPVTEFTIIEMLRYTLAHADRNYPQKNMVRDKVHKASLSLCMIVLILGLGIAIALVHSKFMHPCQCHARKIHASGAELEVPQMQPKIDWYKIRHIW 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1565 628 SUPERFAMILY Protein kinase-like (PK-like) 4 107 IPR011009 -
Glsi06g1565 628 Gene3D - 313 530 IPR027417 -
Glsi06g1565 628 SMART serkin_6 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1565 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 463 IPR027417 -
Glsi06g1565 628 Pfam 50S ribosome-binding GTPase 326 419 IPR006073 GO:0005525
Glsi06g1565 628 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Glsi06g1565 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Glsi06g1565 628 ProSiteProfiles Protein kinase domain profile. 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1565 628 PANTHER INTERFERON-INDUCED PROTEIN 44 233 554 - -
Glsi06g1565 628 CDD Ras_like_GTPase 327 435 - -
Glsi06g1565 628 Pfam Protein kinase domain 3 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1565 Glsi-ChrGlsi06 60711702 60726318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1565 1 108 CBL-interacting serine-threonine protein kinases AT5G25110 78.704 6.18e-48 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi06g1565 MMR_HSR1 1.4e-05 CL0023