Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1548 ATGGTTAACTGGGCCACTTCATTATTTCTAACCAACTCTCTAGAACCCCTTAAGTCTTCCCCTTCACTCCGTTTTAAAGCCCCTTCATCATTTCTTCTACCGTTCTCAGCTCTTACCTCTTTTAGCTTCCTTCTTTTTTGTCTGCATTCCTTGATTTTCGTGTCACAGATGGATGAGGATTTCGATATGCCCCCGCCGGAAGAGATGAACGAGGACTTCGATCTCCCCGATGATACCCCCAATCTCGAGGTTGGGGAGGAGAAAGAGATCGGCAAGCAGGGCTTGAAGAAGAAGCTCCTCAAGAAAGGTGAAGGCTGGGAAACCCCTGAAGCTGGTGACGAAGTTGAAGTTCATTATACGGGAACGCTGCTTGATGGGACCAAGTTCGATTCAAGCCGCGACAGGGGAACCCCCTTCAAGTTTGCACTCGGACTAGGGCAAGTAATCAAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTCCTGAGCTAGCATATGGTGAATCCGGTTCTCCTCCAACAATTCCTCCTAATGCTACTCTTCAATTTGATGTTGAGCTGCTGTCTTGGAGTAATGTAAAGGACATATGTAAAGATGGTGGCATATTAAAGAAGATACTTACTGCGGGGGAGAAATGGGAGAACCCCAAGGATCTTGATGAAGTTTTAGTTACGTATGAAGCCCTGCTTGAAGATGGAACTCTTGTCGCCAAATCTGATGGAGTGGAGTTCACAGTCAAAGAGGGATATTTTTGTCCTGCATTGTCAAAGGCTGTTAAAACCATGAAGAAAGGAGAGAAAGTGCTTTTGACTGTGAAGCCACAATATGGCTTTGGTGACAAGGGGAAGGCAGCATATGGTGATGAAGGTTCGGTTCCACCAAATGCAACATTGAACATTACTCTTGAGTTGGTGTCTTGGAAGACTGTATCAGAGGTAACTGATGATAAGAAGGTCATTAAGAAGATCCTCAAAGAAGGGGAAGGATATGAGCGTCCAAATGAGGGAGCTATTGTGAATTTGAAATTGATTGGTAAACTGCAAGATGGTACTGTCTTTGTGAAAAAGGGCCATGATGAAGAGGATCTGTTTAAATTCAAAACAGATGAAGAGCAAGTCGTTGATGGCCTTGATAGAGCAGTGATGACTATGAAGAAAGGTGAGATAGCACTTTTGACAATCGCTCCTGAGTATGCATTTGGTTCATCTGAGTCCAAGCAGGAGTTGGCTGTGATTCCTCCCAACTCAACTGTTTATTATGAGCTTGAGCTAGTATCATTTGAGAAGGAGAAGGAATCCTGGGATATGGACACTCAGGAGAAAATTGAAGCTGCTTGTAGGAAGAAAGAAGAAGGGAATGTGTTGTTTAAGAGTGGAAAATATGCAAGAGCTTCTAAAAGATACGAGAAGGCTGTAAAGTTCATAGAGTATGATTCCTCCTTCAGTGAAGAGGAGAAGAAGGCGGCCAAGGCACTGAAGGTTGCTTGCAACCTGAACAATGCTGCTTGCAAGCTGAAGTTAAAAGATTACAAAGAGGCGGAGAAATTATGTACAAAGGTGCTGGACCTTGAAAGTAGGAACGTGAAGGCACTTTATAGACGGGCCCAGGCATATATCCAGCTGGCCGACCTGGATTTGGCTGAATTTGATGTCAAGAAAGCTCTTGAGATTGACCCGGACAACAGGGATGTCAAGCAGGAATACAAGACTTTGAAGGAAAAGATGAAGGAGTATAACAAAAGAGAGGCCAAATTTTATGGAAATATGTTTGCCAAGATGACTAAGAAACCAGCGACCAAGGATGCAGCTGAACCCTTGAGTATTGACAGCAAGGCATAA 1866 0.4384 MVNWATSLFLTNSLEPLKSSPSLRFKAPSSFLLPFSALTSFSFLLFCLHSLIFVSQMDEDFDMPPPEEMNEDFDLPDDTPNLEVGEEKEIGKQGLKKKLLKKGEGWETPEAGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFALGLGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWSNVKDICKDGGILKKILTAGEKWENPKDLDEVLVTYEALLEDGTLVAKSDGVEFTVKEGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGDKGKAAYGDEGSVPPNATLNITLELVSWKTVSEVTDDKKVIKKILKEGEGYERPNEGAIVNLKLIGKLQDGTVFVKKGHDEEDLFKFKTDEEQVVDGLDRAVMTMKKGEIALLTIAPEYAFGSSESKQELAVIPPNSTVYYELELVSFEKEKESWDMDTQEKIEAACRKKEEGNVLFKSGKYARASKRYEKAVKFIEYDSSFSEEEKKAAKALKVACNLNNAACKLKLKDYKEAEKLCTKVLDLESRNVKALYRRAQAYIQLADLDLAEFDVKKALEIDPDNRDVKQEYKTLKEKMKEYNKREAKFYGNMFAKMTKKPATKDAAEPLSIDSKA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1548 621 PANTHER PEPTIDYLPROLYL ISOMERASE 81 199 - -
Glsi06g1548 621 SUPERFAMILY FKBP-like 90 204 - -
Glsi06g1548 621 FunFam Peptidylprolyl isomerase 442 597 - -
Glsi06g1548 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 107 197 IPR001179 GO:0003755
Glsi06g1548 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 223 313 IPR001179 GO:0003755
Glsi06g1548 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 339 434 IPR001179 GO:0003755
Glsi06g1548 621 Gene3D - 204 317 IPR046357 GO:0003755
Glsi06g1548 621 Gene3D - 318 438 IPR046357 GO:0003755
Glsi06g1548 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 345 437 IPR001179 GO:0003755
Glsi06g1548 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 228 317 IPR001179 GO:0003755
Glsi06g1548 621 Gene3D Tetratricopeptide repeat domain 440 597 IPR011990 GO:0005515
Glsi06g1548 621 FunFam Peptidylprolyl isomerase 204 317 - -
Glsi06g1548 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 112 200 IPR001179 GO:0003755
Glsi06g1548 621 SUPERFAMILY FKBP-like 322 456 - -
Glsi06g1548 621 Pfam Tetratricopeptide repeat 537 570 IPR001440 GO:0005515
Glsi06g1548 621 Coils Coil 570 590 - -
Glsi06g1548 621 Gene3D - 87 203 IPR046357 GO:0003755
Glsi06g1548 621 SUPERFAMILY FKBP-like 204 320 - -
Glsi06g1548 621 SUPERFAMILY TPR-like 442 603 IPR011990 GO:0005515
Glsi06g1548 621 SMART tpr_5 503 536 IPR019734 GO:0005515
Glsi06g1548 621 SMART tpr_5 454 487 IPR019734 GO:0005515
Glsi06g1548 621 SMART tpr_5 537 570 IPR019734 GO:0005515
Glsi06g1548 621 FunFam Peptidylprolyl isomerase 85 203 - -
Glsi06g1548 621 ProSiteProfiles TPR repeat profile. 537 570 IPR019734 GO:0005515
Glsi06g1548 621 FunFam Peptidylprolyl isomerase 318 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1548 Glsi-ChrGlsi06 60167536 60175393 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1548 57 602 Calmodulin-binding Proteins AT3G25230 80.510 0.0 878