Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1535 ATGACCAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATACGGTACCCGATATGGTGCTAGTCTAAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGGAAGTATGCTGTTAAGAGGAAGGCTGTGGGTATCTGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACGCTGAATACTGCAAGTGCTGTGACTGTCCGGAGTACTATTCGAAGGCTGAGAGAGCAAACTGAGGGTTGA 279 0.4659 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1535 92 Pfam Ribosomal L37ae protein family 4 88 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi06g1535 92 Gene3D - 1 92 IPR011331 GO:0003735|GO:0005840|GO:0006412
Glsi06g1535 92 PANTHER ZGC:171772 1 91 - -
Glsi06g1535 92 SUPERFAMILY Zn-binding ribosomal proteins 10 82 IPR011332 GO:0006412
Glsi06g1535 92 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 4 72 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi06g1535 92 FunFam 60S ribosomal protein L37a 2 92 - -
Glsi06g1535 92 NCBIfam ribosomal protein eL43 1 91 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1535 Glsi-ChrGlsi06 59727326 59729083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1535 1 91 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 94.505 1.48e-59 175