Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1523 ATGGCGTTAGCTAGCTTCTATTCTCTGACGCTCCTACTTTTCTTCTCTTACTTCCTTCATCTCAACATACCAACTCTCTCATCACCCGCTTCGACCTTTCCTGCGGAAGCCCTTCCCACCAGGTCTGGTTACCTCCCAGTGAAACCCGAATCCAACTCCTCCATCTTCTACATCTTCTATGAAGCCCAGAAGACCATCTCACCTCTCTCAGAAACCCCACTTCTCTTCTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGGTCGGAAACTTCTTAGAACTTGGCCCCTGGCGTGTCATTTCTCCCACCCAAAATTCTGAATCCATTTCGCTTGAAAAGAATCCTGGTTCTTGGAATCGAATCTTTGGGCTTGTTTTTCTTGATAATCCTATAGGAACAGGGTTCAGCGTTGCATCCACCCCTGAAGAGATTCCAAGAGACCAGAGATCTATCGCAGAGCACCTTTTTTCTGCGATCACAGCATTCATTGATCTCGACCCAGAATTCAAGTCTCGGCCAATTTACATCACGGGTGAGAGCTATGCTGGGAAGTATATTCCAGCAATTGGGTATCACATTTTGAAGAAGAATAAGGACCTACCTCTGTCCAAAAGGGTGAATTTGGCTGGTGTTGCTATTGGGGATGGCATGACAGATCCAGTGACTCAGGTGAAAACTCACGCTGTAACTGCTTATCATTGCGGGTTGATTAATCAGAGGCAGAAGGAAGAGGTAGAGAAGGTTCAATTGGAAGCAGTGAGCTTGGCAAGAAGTGGAAATTGGGGTAAAGCGAGAAATGCAAGGGGGAGAGTCTTTAGAACATTGAAAAATATGACAGGATTGGCCACTTCGTTCGATTTTACAAAGAAAGTTCCTTACCCAACAAAATTGGTCACTAGGTTTCTAAACCAGAATGAGGTGAAAAAGGCTTTGGGAGTGAAGGAATGGGTGGTTTATAAGTATTGCAGTAAAGATGTGAAGAAGGCACTACATGAAGATGTGATGAAGAGCGCAAAACACATGGCGGAGTACGTGGTGAAAAATAGCAAAGTGTTGATGTATCAGGGCAATTTTGATTTGAACGATGGTGTGGTTCAAGTTGAGGCTTGGGTGAAAACAATGAAATGGGAGGGAATTGAAGAGTTCTTGAGAGCAGAGAGGAAGATCTGGAAAGTAAATGGGGAGCTTGCTGGGTATGTGCAGAAATGGAAGAGTCTTACCAATGTTGTGGTTTTAGGGGCTGGGCATCTTTTGCCAGCTGACCAGGGAGTCAATTCTCAGGCTATGATAGAAGACTGGATTTTGGAAAAGGGCTTATTCGGCAACGTAGAGCATCTAGAGTTATCATGA 1350 0.4526 MALASFYSLTLLLFFSYFLHLNIPTLSSPASTFPAEALPTRSGYLPVKPESNSSIFYIFYEAQKTISPLSETPLLFWLQGGPGCSSMVGNFLELGPWRVISPTQNSESISLEKNPGSWNRIFGLVFLDNPIGTGFSVASTPEEIPRDQRSIAEHLFSAITAFIDLDPEFKSRPIYITGESYAGKYIPAIGYHILKKNKDLPLSKRVNLAGVAIGDGMTDPVTQVKTHAVTAYHCGLINQRQKEEVEKVQLEAVSLARSGNWGKARNARGRVFRTLKNMTGLATSFDFTKKVPYPTKLVTRFLNQNEVKKALGVKEWVVYKYCSKDVKKALHEDVMKSAKHMAEYVVKNSKVLMYQGNFDLNDGVVQVEAWVKTMKWEGIEEFLRAERKIWKVNGELAGYVQKWKSLTNVVVLGAGHLLPADQGVNSQAMIEDWILEKGLFGNVEHLELS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1523 449 SUPERFAMILY alpha/beta-Hydrolases 39 435 IPR029058 -
Glsi06g1523 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 406 419 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 Coils Coil 238 258 - -
Glsi06g1523 449 FunFam Carboxypeptidase 24 441 - -
Glsi06g1523 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 422 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 Pfam Serine carboxypeptidase 37 434 IPR001563 GO:0004185|GO:0006508
Glsi06g1523 449 Gene3D alpha/beta hydrolase 22 441 IPR029058 -
Glsi06g1523 449 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1523 Glsi-ChrGlsi06 59268155 59269504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1523 292 434 Calmodulin-binding Proteins AT2G22960 21.429 3.88e-08 51.6