Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1521 ATGGTCGGAAACTTCTTGGAACTTGGCCCCTGGCGTGTCATTCCTCGCACCCAAAATTCTGAATCCATTTCGCTTAAAAAGAATCCTGGTTCTTGGAATCCAATCTTTGGGCTTGTTTTTCTTGATAATCCTATAGGAACAGGGTTCAGCATTGCATCCACCCCGGAAGAGATTCCAAGAGACCAGAGATCTATCGCAGAGCACCTTTTTTCTGCGATCACAGCATTCATTGATCTAGACCCAGAATTCAAGTCCCGGCCAGTATACATCACGGGCGAGAGCTATGCTGGGAAGTATATTCCAGCAATTGGGTATTACATTTTGAAGAAGAATAAGCACCTACCTGACTCCAAAAGGGTGAATTTAGCTGGTGTTGCTATTGGGGATGGCTTGACAGATCCGGTGACTCAGGTGAAAACTCACGCTGTAACTGCTTATTATTGTGGCTTGATTAATCAGAGGCAGAAGCAAGAGGTAGAGAAGGTTCAACTAGAAGCAGTGAGCTTGGCAAGAAGTGGACATTGGAGTAAAGCGACAAATGCAAGGCAGAGAGTCTTTAAAACGTTGGAAAATATGACAGGATTGGCCACTTTGTTAGATTTTACAAAGAAAGTTCCTTATCAAACAAATTTGGTCACTAAGTTTCTAAAGCAGAATGAGGTGAAAAAGGCCTTGGGAGTGAAGGAAGGGGTGGTTTATAAGTATTGCAGTAATGTTGTGAAGAAGGCACTACATGAAGATGGGATGAAGAGCGCAAAACACATGGCGGAGTACGTGGTGAAAAATAGCAAGGTGTTGATGTTTCAGGGCAATTTTGATTTGAGGGATGGTGTGGTTCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAGGGAATTGAAGAGTTCTTGAGAGCAGATAGGAAGATCTGGAAAGTAAATGGGGAGCTTGCTGGGTATGTGCAGAAATGGAAGAGTCTTACCAATGTTGTGGTTTTAGGGCCTGGACATCTTTTGCCAGCTGACCAGGGAGTCAATTCTCAAGCTATGATAGAAGATTGGATTTTGGAAAAGGGCTTATTCCGCAATGTGCAGGAGCTAGAGTTGTCATCAAAACCTTGGAATTCAGTGTGA 1113 0.4358 MVGNFLELGPWRVIPRTQNSESISLKKNPGSWNPIFGLVFLDNPIGTGFSIASTPEEIPRDQRSIAEHLFSAITAFIDLDPEFKSRPVYITGESYAGKYIPAIGYYILKKNKHLPDSKRVNLAGVAIGDGLTDPVTQVKTHAVTAYYCGLINQRQKQEVEKVQLEAVSLARSGHWSKATNARQRVFKTLENMTGLATLLDFTKKVPYQTNLVTKFLKQNEVKKALGVKEGVVYKYCSNVVKKALHEDGMKSAKHMAEYVVKNSKVLMFQGNFDLRDGVVQVEAWVKTMKWEGIEEFLRADRKIWKVNGELAGYVQKWKSLTNVVVLGPGHLLPADQGVNSQAMIEDWILEKGLFRNVQELELSSKPWNSV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1521 370 Gene3D alpha/beta hydrolase 1 358 IPR029058 -
Glsi06g1521 370 Pfam Serine carboxypeptidase 1 348 IPR001563 GO:0004185|GO:0006508
Glsi06g1521 370 ProSitePatterns Serine carboxypeptidases, serine active site. 90 97 IPR018202 GO:0004185
Glsi06g1521 370 SUPERFAMILY alpha/beta-Hydrolases 1 349 IPR029058 -
Glsi06g1521 370 Coils Coil 152 172 - -
Glsi06g1521 370 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 336 IPR001563 GO:0004185|GO:0006508
Glsi06g1521 370 PRINTS Carboxypeptidase C serine protease (S10) family signature 41 51 IPR001563 GO:0004185|GO:0006508
Glsi06g1521 370 PRINTS Carboxypeptidase C serine protease (S10) family signature 28 40 IPR001563 GO:0004185|GO:0006508
Glsi06g1521 370 PRINTS Carboxypeptidase C serine protease (S10) family signature 320 333 IPR001563 GO:0004185|GO:0006508
Glsi06g1521 370 PRINTS Carboxypeptidase C serine protease (S10) family signature 76 101 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1521 Glsi-ChrGlsi06 59244827 59245939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1521 212 348 Calmodulin-binding Proteins AT2G22960 21.831 7.22e-07 47.4