Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1519 ATGGCTTCATTTCTCTGCTCAAGAGCTGAAAGCTCCCATGCAAATCAACCCAAGCCCGACAACTACTCCCAACCCCATGACCAGGAGCTTCTGGGGAGGGATGACATCCAGGGAATTACCAAGCCCGCGATTCACCGTCTTGCAAAGCGTGGTGGAGTAAAGCATATCAGCGTCAAGCGTATCAGCGTATTGATCTACAAGGAGACTCGTGGGGTGCTCAAGATTTTCCTTGAGAACGTGATTCGCGATGCCGTTACCTACACCGAGCATGCTCGCCGCAAGACTGTAGCTCACCACCCCTCGAACCCCATTAAAGAATACAATGATGGGAACACTAAGATGCAGCTTCAGCGTCCTGGGCCATTCTACTTCATCAGTGGAGCAAAGGGGAACTGCGAGAAGGGCCAAAAGCTCGTTTTGGTTGTTATGACTCCAAGACACAATTATAGCAGTATCTCTCTAGCACCTTCTCCTGCGGAATTCCAAGGTCCCGCTGTTACGTTGTCTACGCGTTGA 516 0.5078 MASFLCSRAESSHANQPKPDNYSQPHDQELLGRDDIQGITKPAIHRLAKRGGVKHISVKRISVLIYKETRGVLKIFLENVIRDAVTYTEHARRKTVAHHPSNPIKEYNDGNTKMQLQRPGPFYFISGAKGNCEKGQKLVLVVMTPRHNYSSISLAPSPAEFQGPAVTLSTR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1519 171 SMART h44 42 104 IPR001951 GO:0003677|GO:0030527
Glsi06g1519 171 SUPERFAMILY Histone-fold 18 97 IPR009072 GO:0046982
Glsi06g1519 171 ProSiteProfiles Phytocyanin domain profile. 101 144 IPR003245 GO:0009055
Glsi06g1519 171 PANTHER HISTONE H4 32 98 - -
Glsi06g1519 171 MobiDBLite consensus disorder prediction 1 23 - -
Glsi06g1519 171 Pfam Plastocyanin-like domain 100 136 IPR003245 GO:0009055
Glsi06g1519 171 Gene3D Histone, subunit A 16 100 IPR009072 GO:0046982
Glsi06g1519 171 MobiDBLite consensus disorder prediction 1 28 - -
Glsi06g1519 171 SUPERFAMILY Cupredoxins 100 143 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1519 Glsi-ChrGlsi06 59227293 59227808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1519 101 166 Phytocyanin Superfamily AT2G25060 65.672 1.20e-23 90.1