Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1514 ATGAGGGTGAGGGTTAGTGAATGGGCTAAGGGGGCTTTAGTAGAAGAGGAGGACTTGGTGGTCACCATTTTAGATCAACATGGCTTTAATACCAAAAATGCTACTAATTGCAAGGAAAAGAATGTGCTAGAAAAGAAATTTTCATTAAAGATAAAGAATAAGTCCTTCCGTGGGAAACTCTGGGTTCATCCCCTCTGTGCTAGGTTCAGAGCTTCGAGCTGCGTTACAAGCAGATTTGTGAGAGACAAAATGGCAGTGCCTTTGCTAAGCAAGAAAATTGTAAAGAAGCGAGTCAAAAAGTTCAAGAGGCCACAGAGTGACAGGAAAATTTCTGTTAAGACCAACTGGAGAAGGCCAAAGGGTATTGATTCTCGCGTAAGGAGAAAATTTAAAGGATGTGTCTTGATGCCAAATATTGGTTATGGTTCAGACAAGAAGACCCGCCACTATCTCCCCAATGGGTTCAAGAAATTTGTTGTCAACAATGTCAAGGAGCTGGAACTTCTGATGATGCACAACAGGACTTACTGTGCTGAGATAGCACACAATGTATCAACTCGGAAAAGAAAGGAGATTGTTGAGCGTGCAGCACAGTTGGATGTTGTTGTTACTAACAGACTGGCCAGGTTGCGCAGTCAGGAGGATGAGTGA 651 0.4286 MRVRVSEWAKGALVEEEDLVVTILDQHGFNTKNATNCKEKNVLEKKFSLKIKNKSFRGKLWVHPLCARFRASSCVTSRFVRDKMAVPLLSKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRLARLRSQEDE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1514 216 CDD Ribosomal_L32_L32e 105 205 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi06g1514 216 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 84 216 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi06g1514 216 SMART Ribosomal_L32e_2 98 205 IPR001515 GO:0003735|GO:0005840|GO:0006412
Glsi06g1514 216 SUPERFAMILY Ribosomal protein L32e 76 214 IPR036351 -
Glsi06g1514 216 Pfam Ribosomal protein L32 99 205 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1514 Glsi-ChrGlsi06 59059777 59066381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1514 84 216 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 6.87e-84 243