Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1489 ATGGCGAAGGCCAATTTTATGGTCTGCTTCCTCTTTCTTTACATTCTCTTGAGCTCTGTTCTAACCCAATCAGCCCCAGAAAGTGCTCTTATAACCCAGATTCCTGGCTTCAATGGCACGCTACCTTCTAAGCACTATGCTGGGTATGTGACCGTGGATGAAAGTCATGGAAGGAACTTGTATTATTATTTTGTTGTATCAGAGAGCAAACCGTCTGAGGATCCCGTAGTTCTATGGCTTAACGGTGGACCAGGGTGCTCTAGCTTCGATGGCTTCGTATACGAGCATGGTCCTTTCATTTTTGAAGCAGCAAAGACTAAGGGAAACCTTCCCAGATTGCAGCTCAATCCTCACAGCTGGTCTAAGGTCTCCAACATTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCTTACTCAAAGAATGAATCTGATTACAATACTGGAGACATAAAGACCGCCACTGATACACACACCTTTCTCCTTAAGTGGTTTGAACTTTACCCTGAGTTCCTTCCCAACCCATTCTTCATTGCTGGAGAGTCATATGCCGGAATTTATGTGCCTACTCTTGCTTATGAAGTAGTGAAAGGAATTGATGCTGGTGCAAAGCCCAATCTGAATTTCCAGGGTTATATGGTAGGAAATGGTGTAACAGATGAAGAGTTCGATGGCAATGCTCTCGTCCCATTTGCACATGGGATGGGTCTTATCTCAGATGATCTGTATGAGGAAGTTAGAGGTGAATGCAATGGGAATTTCTATAAGCCACTCAGTGAAAGTTGCGCTGGCAAGCTCTCAAAAGTTGATGAGGACATTGATGGATTAAATATATATGACATTCTAGAACCATGCTATCATGACACAGAGTCAGGGAAAATTATAACTTCCAATATTAGGTTGCCATCCAGCTTCCAGCAATTGGGTGAGACTGAGAGACCGCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCATGGCCCCTTAGAGCACCTGTGAGAGATGGAATTGTTCCAACTTGGCCACAACTTAGCAATAGCAACGATGTTCCATGCACTGATGACGAGGTTGCAACCTCATGGTTGAACAATGAAATGGTCAGGAAAGCAATTCACACTGTACAGGAGAGTGTGGTCAGTGATTGGTTCTTATGTACTGACAAAATTGAATACCATCATGATGCTGGGAGCATGATCAGGTACCACAAGAACCTAACTTCCAGAGGATATCGAGCACTTATATACAGTGGCGATCATGATATGTGTGTTCCATTTACTGGGAGCGAAGCGTGGACAAGATCAGTTGGATACAAGATTGTCGATGAATGGAGGCCTTGGACATCCAATGGTCAAGTCGCTGGGTTTACTCAAGGATATGACAAAAATCTTACTTTCCTCACCATAAAGGGAGCCGGACACACTGTTCCAGAATATAAACCACAAGAGGCATTGGACTTTTATAAACGATTTATCACTGGTCTGCATCTGTAA 1488 0.4355 MAKANFMVCFLFLYILLSSVLTQSAPESALITQIPGFNGTLPSKHYAGYVTVDESHGRNLYYYFVVSESKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFIFEAAKTKGNLPRLQLNPHSWSKVSNIIYLDSPAGVGFSYSKNESDYNTGDIKTATDTHTFLLKWFELYPEFLPNPFFIAGESYAGIYVPTLAYEVVKGIDAGAKPNLNFQGYMVGNGVTDEEFDGNALVPFAHGMGLISDDLYEEVRGECNGNFYKPLSESCAGKLSKVDEDIDGLNIYDILEPCYHDTESGKIITSNIRLPSSFQQLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSNDVPCTDDEVATSWLNNEMVRKAIHTVQESVVSDWFLCTDKIEYHHDAGSMIRYHKNLTSRGYRALIYSGDHDMCVPFTGSEAWTRSVGYKIVDEWRPWTSNGQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPQEALDFYKRFITGLHL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1489 495 SUPERFAMILY alpha/beta-Hydrolases 31 493 IPR029058 -
Glsi06g1489 495 FunFam Carboxypeptidase 397 492 - -
Glsi06g1489 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Glsi06g1489 495 FunFam Carboxypeptidase 24 308 - -
Glsi06g1489 495 Pfam Serine carboxypeptidase 35 491 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 Gene3D alpha/beta hydrolase 23 321 IPR029058 -
Glsi06g1489 495 Gene3D - 347 493 - -
Glsi06g1489 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 479 IPR001563 GO:0004185|GO:0006508
Glsi06g1489 495 FunFam Carboxypeptidase 350 494 - -
Glsi06g1489 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1489 Glsi-ChrGlsi06 57955175 57965884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1489 356 495 Calmodulin-binding Proteins AT2G22960 47.857 9.91e-41 143