Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1448 ATGAGTGCTCAATTACAAGAAGTTGAATATAATAAACAAGAAGAAGCAGAAAAAAACCGGCCGCTGCAACAATGTGAAACATTACCGTTGTTCTCGCGGTTGCCGTCGGCACCGCAGTCCTCTCATGACGTAAGTGAGGAAGAAGTTGCGTATGCAGCCAATGAGAAAGTCCAGATATTCGATTTAGAGTCTTCCGGCATCGCCAACTCTATGGCGGTGCCGTCATTTTCGTGGAAGAAGCTGTGGTTGTTCACGGGGCCTGGGTTGTTAATGAGCGTGGCGTTCCTGGACCCAGGAAATCTGGAAGGGGATCTTCAGGCTGGAGCCGTTGCTGGGTACTCGTTGCTTTGGCTATTGATGTGGTCCACGCTAATGGGTCTACTTATACAGCTGCTGTCGGCTAGGCTTGGGGTGGCAACAGGGCGGCACCTGGCGGAGCTGTGCAGGGAGGAGTACTCAAATTGGGCTAGGTTGGTACTGTGGGTGCTGGCAGAGGTGGCATTGATTGCTGCGGATATTCAAGAGGTTATTGGGAGTGCTATAGCTATAAAGATTCTTAGTCATGGGATTGTGCCCATTTGGGCCGGAGTGGTAATCACAGCCATGGATTGTTTTGTCTTTCTATTTCTTGAGAACTATGGAGTAAGGAAGCTGGAAGGAATTTTTGCAATTTTCATTGGAACTATGGCCCTTTCTTTTGCTTGGATGTTCGTTGATACAAAGCCAAGTGGAAAAGAACTTCTAATGGGTATTTTGGTCCCAAAAGTTAGCTCAAAAACACTTCGCCAGGCCGTTGAACTTGTAGGTTGTGTTATAACCCCACATAATGTATTCCTCCATTCTGCTTTGGTACAATCAAGGAACATTGATACCCATAACAAAGTGCAGGTTCAAGAGGCTCTCAACTACTACACAATTGAGTCATCCATTGCACTTTTAATCACTTTCGTGATCAATCTATTTGTGATGACTGTTTTTGCAAGGGTTTTCTATGGTACAGAACAGGCTAAGGGCACTGGATTGGTAAATGCAGGGCAATATCTTCAGGAGAGGTATGGAGGAGGATTCTTCCCCATTCTCTATATATGGGGTATTGGTTTGTTGGCAGCTGGACAGAGTAGTACCGTTACAGGCACATATGCTGGACAGTTCATAACAGAGGGCTTTCTGAAGCTCCATTTGAAGAAATGGTTGAGAGCATTGATCACCCGAAGTTTTGCAATTGTTCCAACTATGATCGTAGCTATTGTTTTTAATACATCAGAAGGTTCATTGGATACCTTGAATGAATGGCTTAATGTGCTTCAGTCAATACAGATTCCTTTTGCACTTATCCCCCTTCTTACCTTGGTATCCAAAGAGGAGGTCATGGGGACCTTTAGAATTGCGCCTGCTGTAGAGAAAGTGGCTTGGATTGTGGCTATGCTAGTAATAATGGTTTACGGATATATGTTACTAGATTTCTTCCTCTCTGAAGTGAAGGGACTGTTTTTTGGTTTTCTGGTCTGCGTTGGCGCAGCTGCATGGGTATCATTCATTGCATATCTGGTTAAACATGGTGGTGCTATTCCTTCTATCCTGGAGAAGTCACCTAATTCTCAAGGCTTTTCTCTTACTGGGAACTAA 1626 0.4471 MSAQLQEVEYNKQEEAEKNRPLQQCETLPLFSRLPSAPQSSHDVSEEEVAYAANEKVQIFDLESSGIANSMAVPSFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAVAGYSLLWLLMWSTLMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWVLAEVALIAADIQEVIGSAIAIKILSHGIVPIWAGVVITAMDCFVFLFLENYGVRKLEGIFAIFIGTMALSFAWMFVDTKPSGKELLMGILVPKVSSKTLRQAVELVGCVITPHNVFLHSALVQSRNIDTHNKVQVQEALNYYTIESSIALLITFVINLFVMTVFARVFYGTEQAKGTGLVNAGQYLQERYGGGFFPILYIWGIGLLAAGQSSTVTGTYAGQFITEGFLKLHLKKWLRALITRSFAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQSIQIPFALIPLLTLVSKEEVMGTFRIAPAVEKVAWIVAMLVIMVYGYMLLDFFLSEVKGLFFGFLVCVGAAAWVSFIAYLVKHGGAIPSILEKSPNSQGFSLTGN 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1448 541 MobiDBLite consensus disorder prediction 1 21 - -
Glsi06g1448 541 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 57 518 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 Pfam Natural resistance-associated macrophage protein 102 462 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 215 236 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 190 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 433 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 Hamap Divalent metal cation transporter MntH [mntH]. 67 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 79 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi06g1448 541 NCBIfam Nramp family divalent metal transporter 86 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1448 Glsi-ChrGlsi06 56492587 56498349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1448 45 519 Inorganic Solute Cotransporters AT1G47240 73.739 0.0 731