Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1445 ATGATGATAATACAGAGTTCTCTTCCTAGTTCAATTGAAGCTCCTCTATTTTATGTTTCTGATAATGGGAAAGATGTTCTCTGTGACCGGATGCCTAGTGCTGAAACTTGGCAGGTGTGCCTGAAATGCAATAAACACCCTCTTGATTGGTGCAGAAAAGCTGAAGCAATGCAAGAGGACAGAAGGAATGCTGATGATCCTTGCAGCTCAAACTTTCTAGGTAGCTTAGGTAGGCCATCAACTGCCAGTACAATGACTGAAAATACTGTGCCTAATATAGTATACAGGAGAAAAAAACTACGGAAGAAATCAACTGCCCCTCTTTCAAAACTGGGACCGATGAATGTGCAGACAAGTGTGAATTGTCCTTCAGTCATAAGTTCCTGTGCTCATTTATCATCAGCCGAGGATCAGCCAGCTGGTTCTCAAGATAAGCATGAGATTGAAATGGTTAAAGATCCTGTTGTTTCTACCGTCTTGTGTGAAGGAGAAATAGAAAATGGCATGCTTAAAACATTAGGTATTGACAGTGTAAATGATAGTTGCTCCTCATCAAAATCAAATATGGAAATTGTTTCAGATTCCGTAGAAACTGAAATGGATGAAACTGGTGAATGCTCCTCCTCTAGTGTAGTAGTTATGGATGTCCAGAGGGAGGACCTATTAGCAAAGGAGTTCTGCATCACCATTTTAAGAACCCATGGACTTCTTGGAGGAGACTCCCATGCTGACAATGTAGCCTCTGTGGGAGAGGCTGCTAGCACATGTAATAGTTGCTGTTCACGGTCATGCAAAATATGTAGTCACTTAGATGGTTCATTGAACATGCTTATATGTGATCATTGTGAAGAGGCATACCATCCATCTTGCTGCGTTCCACGTTTGAAAAAGTTACCAGTTGATGAGTGGTTTTGTCATTCATGTCTAAAAAAGAAGCAAAAAATTCTTAGGGAGACGATTATTAGATGTTCGCCGGGTATCAACAATGAAATGGACATATGTAGAACTGAGTCAGTTAGGGGTGAATTGAATCCAATACTGTTGATGTTGAATGACACTGAGCCAAATACATCTGGTGTAAGGGTCGGTAAAGGTTTTCAAGCAGAAGTTCCTGACTGGTCAGGTCCAATAAGAAGAGAGTGTAAGTTCCAGGCTTCAGTATCTGGAAAAGCTGTACTATCACTCGAATCAGTGTCACATTACACATTCCTACTACTTTTTCTAACAGAGAAAGTGGAAATGTTTAATGGCAGAAATAATGAGGTTTATTCTGTGCTAGTTTTAAGACATGATGTATTGGGGACGAGTGGAATCACTTCACCTTCATCTTTATCTTCCGTCATAAGTGGAACTGGACAGATAACTGATGCTATAGTTGTGAGCAACTTCTCTAATACACAAAGATACATTCAATACAAGAACAGCTGA 1428 0.402 MMIIQSSLPSSIEAPLFYVSDNGKDVLCDRMPSAETWQVCLKCNKHPLDWCRKAEAMQEDRRNADDPCSSNFLGSLGRPSTASTMTENTVPNIVYRRKKLRKKSTAPLSKLGPMNVQTSVNCPSVISSCAHLSSAEDQPAGSQDKHEIEMVKDPVVSTVLCEGEIENGMLKTLGIDSVNDSCSSSKSNMEIVSDSVETEMDETGECSSSSVVVMDVQREDLLAKEFCITILRTHGLLGGDSHADNVASVGEAASTCNSCCSRSCKICSHLDGSLNMLICDHCEEAYHPSCCVPRLKKLPVDEWFCHSCLKKKQKILRETIIRCSPGINNEMDICRTESVRGELNPILLMLNDTEPNTSGVRVGKGFQAEVPDWSGPIRRECKFQASVSGKAVLSLESVSHYTFLLLFLTEKVEMFNGRNNEVYSVLVLRHDVLGTSGITSPSSLSSVISGTGQITDAIVVSNFSNTQRYIQYKNS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1445 475 SMART PHD_3 263 309 IPR001965 -
Glsi06g1445 475 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 175 320 IPR013083 -
Glsi06g1445 475 SUPERFAMILY FYVE/PHD zinc finger 260 314 IPR011011 -
Glsi06g1445 475 ProSiteProfiles Zinc finger PHD-type profile. 261 311 IPR019787 -
Glsi06g1445 475 PANTHER TRANSCRIPTION INTERMEDIARY FACTOR 216 314 - -
Glsi06g1445 475 Pfam PHD-finger 264 310 IPR019787 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Glsi06g1445 PHD 7.6e-09 CL0390