Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1411 ATGGCACCACATGGGGATGATCAAAGCCAGAAGAAGCTTGACTTCATGAAGCTTTCCAATGGCAACCATTCAGTTTGTGAGTTGAAGGAAGGAGTGGATTCTTTCAACTCTAGGAATATTCTAGGTTCATCTTCTAGGGCAAAAAATAATAATAACGACGAAAACGAAGATGATGATGATAATGATGATGAGGGTCGTGAGAAGATGGCGTCATTGGAGAGAATGACTTTCTGCTGCAACTTTTGTAAGAGAGAGTTTTCTTCCTCCCAAGCTTTGGGAGGGCATCAAAACGCTCATAAACAAGAGCGTACACTTGCAAAACGATGTCAAGGGATGATTGTTGATGCTGGAGATAAATCCAGGACACTTGGGGTTCGAATGGAATCCATGATTCACAAGCCTTATAATCCTTGGGCTGCTGGGTGGTCATCAGCTAGCTAG 441 0.4308 MAPHGDDQSQKKLDFMKLSNGNHSVCELKEGVDSFNSRNILGSSSRAKNNNNDENEDDDDNDDEGREKMASLERMTFCCNFCKREFSSSQALGGHQNAHKQERTLAKRCQGMIVDAGDKSRTLGVRMESMIHKPYNPWAAGWSSAS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1411 146 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Glsi06g1411 146 MobiDBLite consensus disorder prediction 36 67 - -
Glsi06g1411 146 SUPERFAMILY beta-beta-alpha zinc fingers 75 105 IPR036236 -
Glsi06g1411 146 Pfam C2H2-type zinc finger 77 101 - -
Glsi06g1411 146 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 5 142 IPR044246 GO:0009788
Glsi06g1411 146 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1411 Glsi-ChrGlsi06 54212009 54217421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1411 70 142 C2H2 Transcription Factor Family AT5G10970 48.889 6.33e-18 75.9