Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1407 ATGGTAGACCGTTTCTCACTCTCCTTGCGTTTCTTTTTCCCCATAATATTTGCATCAAATGTACGACTGAATGTAATTTCTACCAAGAGAACCAAGAAGGCTGGTATTGTTGGGAAATACGGTACCCGATATGGTGCTAGTCTAAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGGAAGTATGCTGTTAAGAGGAAGGCTGTGGGTATCTGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACGCTGAATACTGCAAGTGCTGTGACTGTCCGGAGCACTATTCGAAGGCTGAGAGAGCAAACTGAGGGTTGA 357 0.4454 MVDRFSLSLRFFFPIIFASNVRLNVISTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1407 118 Gene3D - 27 118 IPR011331 GO:0003735|GO:0005840|GO:0006412
Glsi06g1407 118 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 30 98 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi06g1407 118 FunFam 60S ribosomal protein L37a 28 118 - -
Glsi06g1407 118 Pfam Ribosomal L37ae protein family 30 114 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi06g1407 118 SUPERFAMILY Zn-binding ribosomal proteins 36 108 IPR011332 GO:0006412
Glsi06g1407 118 NCBIfam ribosomal protein eL43 29 117 IPR002674 GO:0003735|GO:0005840|GO:0006412
Glsi06g1407 118 PANTHER ZGC:171772 25 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1407 Glsi-ChrGlsi06 53978414 53983276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1407 29 118 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 94.444 5.94e-59 174