Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1381 ATGTCCTTCAATCAATCTAAGTCCGATAAGAGCGACACTCAGTATACAAAGACTGGGCGATCGGCGAACTTCAATCAGCAGCGAAATTCCTCAGGCGCGTACGTGAAGGGCGGCGGGGGCGGGCCCGCGCCTTCACCGTCGATCACCTCGGGTTCCTCCCCCTCGTCTAATCGGAGTTTTAAGAAGTCTTACAATGCACAAGGGGGGCAATCTAGGGTAAACCCTCCCACTGTGAGTTCAGCGGAGTCTAATAGTGCTTCTACTGCCCGGACAGTACAGAACGGTACCCATGTACAGTCACAACTACATGCATCTGATGCACCAGTTACAAATGCAACGGCCAAGCCAAGTGAATCATCAGCTTCACAGAGGAGTGCCAGAATTCTTCCAAAAGCTCCAACTTCTCAACCTCCCCCTGTGAGTTCTGATCCAGCAGCTCCTACAACACCTGTTAAGGCTCCAGGAGATGCAGCCAAGGCATTCCCTTTTCAATTTGGATCCATTAGTCCCGGTTTTATGAATGGGATGGCAATTCCTGCTCGTACAAGTTCAGCTCCTCCTAATTTGGATGAGCAGAAACGTGACCAAGCTCGTCATTGTCATGATTCCTCGAAAACTGTGTCAACACTTCCAGTTCCAAAGCAGCAGCCACCGAGGAAGGATGCAGGTGTTGCTGACCAATCTAATGATGTGGAGGCTCATTCAGGGATCAAGGCCAAAAAGGATCCTCAGGTGTCACCTTTGCCCCCATCAAGCCAGATGCAGAAACCTTCTGTTGTTCCGTTGACTGGGATGTCCTTGGCAATGCCATATCATCAGTCACACTCACAGGCATCTGTACAGTTTGGTGGTCCTAACCCACTGATTCATTCTCAGGGTATGTCAACGGCATCTCTTCAGATGCCTATACCAATGCCTTTACCCATTGGAAATGCTGCACAAGTGCAACAGCAGGTTTTTGTTCCTAGTCTTCAGCCTCACCCTATGCATCCTCAAGGAATCATGCATCAAAGCCAAAACATGAGTTTCACAACTCAAATGGGTCCTCAGTTGCCTCATCAATTGGGCAACATGGGTATCAGCATCAGCCCGCAGTATACCCAGCAGCAAGGAGGAAAATTTGCTGGTCCTCGTAAAGCTACAACTGTAAAGATAACTCATCCTGAGACACATGAAGAACTGAGACTTGACAAAAGGGCAGATGCTTATTCAGATGGCAGTTCCTCAGGTGCAAGGTCTCATCCTAACTTGTCTTCTCAATCCCAACCAGTTCCATCACTTGCATCTTCTCTTCCTGTGAATTATTATCCGCCCAGCTCGTACAATGCCAGTTCTTTGTTTTTTTCGTCTCCTAATTCTCTTCCTATAACCAGCAGCCAGAAAACACCTAATTCTCAGCCACAAAGATTTAATTACCCTGGGAACCATGGCCCCCAAAATGTTTGTTTCATGAATCAATCATCTCTTAGTTCCCTGCCTGTTAATAGGACTGGCATTCCTATTCCTGGCATTGTTGAACCACCTAATCCAGAACATTTGCGTGATGTGCACAATGTGAGCTCATCATCAGGGGTAACTTCCGTGACTATAAAGCCAGGCGGTGTCTCTGGGGTTGTGGATTCATCATTGTCCAATTCTAGTATCTCTGGCATTGGAAAGAGTGAATCTCATTCTTTAGTGGCATCTAATGATTCTAGTTCCTCTGTGCTCCAAAAGGGGTTGGAAAGTTGTTCTGATGTCCCTTCACAACAGTCAAAGTTGTCCAATGATTGTTCAGCTTCAAGGCCCTCGCCAAAACAATCTATTGCTGTTTCTGCTGAGAACCTTACAAAAATTCACTCGATGCATTTTTCAGCTGCTGTGAGTGAGGATTCTATTTCAGTTGTGTCCAATAAGGAACTCCAAAGAAAGGAATCTCTTAGCAGGTCAAACTCTTTGAAAGATAATCAGAAGAAACCTGGGAATAAAGGCCAATCACCAAACCAGGTTGTTATACAATCTCCTTTGGGGGCAAGTGCTCCATCTAGGAATGTTGACAGTGGCATATGTGATGGGGGAGTTTCTGAAACTAGAGAAACTAAAACAAATTATTCTGCGGCATTATCCATTGGAAATGTCCCAGCAGCTCCTGACACATTGTCAGCTACCCGTGGTAGCACTAGTAATGCTGTTGAAGTGAAGACTAACTTCTCTGCAGAAGGTCCTCCTTGCATTTCTGCTGAAGGACCTGGTGCTCAAGTTGTTGATAGTTTGAACAATGATAAGCATGATCAACTAGAGGAATCATCGCAAGAAGATAAACTATTGAAGGAGTATATTTTGGGAATGTGTGATAACAATAAAAGATCTCCTGAAGAATCTAAACAAAATAATGACGATAGTGGCTCATCTGTAGGATCTGTCACTTCCAAGTCCACTGAATTTAAGCAAACTGAACTTGATGCAACAAAAGCAAGCACTGAGGTCCTAACTTTGGAGACAGCACAGCAGGGACAGGATGAATCTATGAGTTGTAGTGCAGAAAGTGACTGGATGGGTGATAATTTAGGCATGTCTACCTCTACTGCATTGGATTCTAGAGAGCTCTCTTTAAATAGAAATGATTCTATATACAGCAACGAAACCTTTTCTTCAAACTCTGGTACATCAGATCAGCAGTCTTCTGATTCTCTAGAATCAACTTCTAAACATAGCAAGGACAGTGCAGAGAATGTTGGCTGTGGTACATTGTCCCTTCTAGTGTCAGGTACCAAGGATAAGACTATTTTAGAACCAAATAAGGTGAAAAGCACATCTAAAGGAAAGAAGAAAAAAAGAGAAATTCTTCAGAAAGCAGATGCTGCTGGGCCAACTTCTGATCTTTATAATGCATATAAGAAACCTGAGGAAAAGAAAGAAGCTGACATAAGTTCTGAGATAACTGAAAGTGCTTCAACTTCTGGAAGTTTGAGTCAGTTTCCTGCAGATGCTACTCTGCAAGATGCTGTAGCAAGTGATAAAGGTGGACACAGTAAAGCTGAGCCTGATGACTGGGAGGATGCTGTTGACATGTCTACCCCAAAATTGGAAGTTGCAGATAAATCGCAACTGGCTAGTGATGGAAGTGGAAGTGCGGCCAAAAAATACTCTCGAGATTTCCTTTTGAAGTTTGCAGAGCAATGCATTGATCTACCTGATGGTTTTGAAATTACTGCAGACATTGCTGAAGCTTTGATGAGTGCTAATATTAGCAGTTCTCATGTAGAACGTGATGTACACCCTAGCCCTGGAAGAAATTTAGATAAGTCAGGAGGGATGCCTCGGATGGACCGTCGCGGGAGCGGTGTGTTTGAAGAAGACAGATGGAGCAGAGTTCCTGGTACTTTTGGTTCAGGACGTGACTTGCGTTCAGATGCCAGTTTTGGAGGTAACGCAGGATTTCGACCTGGCCAAGGAAGCAATTTTGGTGTTTTAAGGAACCCACGGGCACAGAATCCTCTGCAATATGCTGGAGGTATCCTTTCTGGACCTGTGCAATCTATGGGAAATCAGGGATGCATACCAAGAAATAGTCCTGACGGTGAAAGGTGGCAGCGTTCTGCTATCTTCCAACAGAGGGGCTTAATTCCCTCTCCTTCTCATCAGACTCCTTTGCAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGCAAGGTGGGTGATGAGGAAGAAGCAAAACAGAGGCAGTTGAAAGCTATCTTAAACAAGCTAACTCCTCAGAATTTTGAAAAGCTTTTTGAGCAGGTAAAAGCAGTTAACATTGACAATGCTACAACTCTCACTGGTGTCATCTCACAAATTTTTGAGAAGGCTTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTACATCTGGCTGTGGAGTTGCCTGATTTCAGTGAAGACAATGAGAAGATAACTTTTAAGAGATTATTATTAAATAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAACAAGAGGAAGCTAATAAGGCTGATGAGGGTGAGGTCAAGCAGTCTGATGAAGAGAGGGAAGAAAAAAGAATTAAGGCACGCAGACGCATGTTGGGTAATATTAGGTTGATTGGAGAGCTATATAAGAAGAAAATGTTGACAGAGAGAATAATGCATGAATGCATTAAGAAGCTACTGGGTCAGTATCAGGATCCTGATGAGGAAGATGTTGAAGCTTTGTGCAAGTTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACACATGGATGCATATTTTGAAAGGATGAAATTATTATCAACCAACATGAATTTATCTTCTAGAGTGAGGTTCATGTTGAGGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAGAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGCCCAAGAGAGGCAGGCCCAAGGTAGAATGGGTCGTGGTCTAGGCAATAATTCGTCAGCAAGAAGGATCCCTATGGATTTTGGTCAAAGAGCTTCATCTATGTTATCTTCTTCTAATACTCAAATTGGTGGATTTCGTGGGCTGACAACTCAAGCTCGTGGGTTTGGTTCTCAGGATGTTCGTTTGGATGATAGGCAATCTTATGAGGCTAGGACCTTGTCTGTTCCCTTGCCTCACAGACCTCTAGGTGATGATTCTCTAACCTTGGGACCCCAAGGTGGTCTTGCAAGAGGAATGTCCATCAGAGTACCGACTGCTACTTCAAGTTCTGTTTCTGATGTACCTTCTGTCCCTGGAGACTCTCAAAGAATTACAAATGGTCTTAATGGTTATAGTAATTTATCTGAACGTGCACCTTATAGCTCAAGGGAGGATCTTGCGCCAAGATATATTCTGGATAGATTAGAAGGTCCAACTGCATATGATCAGTCAAGTGCTCAGGAGCATAATATGAATTATGGTAACAAGGACTCGAGAAATGCAGATTGGAGTTTTGACAGATCTGTTGCAACTTCACCTCCTGCTCGAATGCCACCAACAGTCTCCCAGAAAACTCCCTCAGAGAAGGTTTGGCCGGAAGAACGACTCCGAGACATGTCCATGTCAGCAATCAAAGAATATTACAGGCCATTACCATATTATCCAATATCCATTGCTTTATGGAGTAGTGCAATCGATTTAGGGAGAGCAGAGCATTGGTTCATAGAGAGAAAGTGTGATACAGAACTTACCTCTGATGCGGCAATGTCTGATTACGAATGATGTAGACTTTGGTTTCCATCACCAGATGAGTTGACATTTGACGAAATGCTATGCTTGATTGCTGTTCCTCCTGCTGGTTGCAGTGCTAGAGATGAGAAAGAGGTTGCTTTATGTGTCAAAGATTTGAACTCTCCTAGCTTCCATTTCACAATGGTTTCTCTCTGGGTCACTGACTCTTTTGAGAGGAAAGACATGGAAAGAGATCTTTTGGCCAAATTGCTTGTAAACCTTGCAAAGTCCCAGGATGGCACCTTGAGTCAATCCCAGCTAATCAAAGGGTTTGAAGCTGTTCTCAGTATTTTGGAGGATGCTGTTAACGATGCTCCCAGAGCAGCAGAATTTCTTGGCCGTATTTTTGCTAAAGTTATAACAGAGAATGTGGTTAGAGGGGAAAAAGACCATTCTAGTGCTGATAGGGTACTTAATTTGCAGAAATGA 5688 0.4378 MSFNQSKSDKSDTQYTKTGRSANFNQQRNSSGAYVKGGGGGPAPSPSITSGSSPSSNRSFKKSYNAQGGQSRVNPPTVSSAESNSASTARTVQNGTHVQSQLHASDAPVTNATAKPSESSASQRSARILPKAPTSQPPPVSSDPAAPTTPVKAPGDAAKAFPFQFGSISPGFMNGMAIPARTSSAPPNLDEQKRDQARHCHDSSKTVSTLPVPKQQPPRKDAGVADQSNDVEAHSGIKAKKDPQVSPLPPSSQMQKPSVVPLTGMSLAMPYHQSHSQASVQFGGPNPLIHSQGMSTASLQMPIPMPLPIGNAAQVQQQVFVPSLQPHPMHPQGIMHQSQNMSFTTQMGPQLPHQLGNMGISISPQYTQQQGGKFAGPRKATTVKITHPETHEELRLDKRADAYSDGSSSGARSHPNLSSQSQPVPSLASSLPVNYYPPSSYNASSLFFSSPNSLPITSSQKTPNSQPQRFNYPGNHGPQNVCFMNQSSLSSLPVNRTGIPIPGIVEPPNPEHLRDVHNVSSSSGVTSVTIKPGGVSGVVDSSLSNSSISGIGKSESHSLVASNDSSSSVLQKGLESCSDVPSQQSKLSNDCSASRPSPKQSIAVSAENLTKIHSMHFSAAVSEDSISVVSNKELQRKESLSRSNSLKDNQKKPGNKGQSPNQVVIQSPLGASAPSRNVDSGICDGGVSETRETKTNYSAALSIGNVPAAPDTLSATRGSTSNAVEVKTNFSAEGPPCISAEGPGAQVVDSLNNDKHDQLEESSQEDKLLKEYILGMCDNNKRSPEESKQNNDDSGSSVGSVTSKSTEFKQTELDATKASTEVLTLETAQQGQDESMSCSAESDWMGDNLGMSTSTALDSRELSLNRNDSIYSNETFSSNSGTSDQQSSDSLESTSKHSKDSAENVGCGTLSLLVSGTKDKTILEPNKVKSTSKGKKKKREILQKADAAGPTSDLYNAYKKPEEKKEADISSEITESASTSGSLSQFPADATLQDAVASDKGGHSKAEPDDWEDAVDMSTPKLEVADKSQLASDGSGSAAKKYSRDFLLKFAEQCIDLPDGFEITADIAEALMSANISSSHVERDVHPSPGRNLDKSGGMPRMDRRGSGVFEEDRWSRVPGTFGSGRDLRSDASFGGNAGFRPGQGSNFGVLRNPRAQNPLQYAGGILSGPVQSMGNQGCIPRNSPDGERWQRSAIFQQRGLIPSPSHQTPLQMMHKAEKKYEVGKVGDEEEAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNATTLTGVISQIFEKALMEPTFCEMYANFCLHLAVELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSTNMNLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQGRMGRGLGNNSSARRIPMDFGQRASSMLSSSNTQIGGFRGLTTQARGFGSQDVRLDDRQSYEARTLSVPLPHRPLGDDSLTLGPQGGLARGMSIRVPTATSSSVSDVPSVPGDSQRITNGLNGYSNLSERAPYSSREDLAPRYILDRLEGPTAYDQSSAQEHNMNYGNKDSRNADWSFDRSVATSPPARMPPTVSQKTPSEKVWPEERLRDMSMSAIKEYYRPLPYYPISIALWSSAIDLGRAEHWFIERKCDTELTSDAAMSDYEXCRLWFPSPDELTFDEMLCLIAVPPAGCSARDEKEVALCVKDLNSPSFHFTMVSLWVTDSFERKDMERDLLAKLLVNLAKSQDGTLSQSQLIKGFEAVLSILEDAVNDAPRAAEFLGRIFAKVITENVVRGEKDHSSADRVLNLQK 1895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1081 1106 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 633 689 - -
Glsi06g1381 1895 ProSiteProfiles MI domain profile. 1761 1888 IPR003891 -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 45 130 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1121 1190 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1551 1612 - -
Glsi06g1381 1895 SUPERFAMILY ARM repeat 1228 1458 IPR016024 -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 646 674 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 957 971 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1476 1498 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 871 904 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 924 1036 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1 33 - -
Glsi06g1381 1895 Pfam MIF4G domain 1234 1456 IPR003890 GO:0003723|GO:0005515
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 972 991 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 452 484 - -
Glsi06g1381 1895 FunFam Eukaryotic translation initiation factor 4G 1234 1469 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1636 1663 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1578 1612 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 753 772 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1000 1020 - -
Glsi06g1381 1895 Coils Coil 1316 1336 - -
Glsi06g1381 1895 SMART ma3_7 1762 1879 IPR003891 -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 732 853 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1 258 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 790 853 - -
Glsi06g1381 1895 Gene3D - 1234 1469 - -
Glsi06g1381 1895 SMART if4_15 1234 1456 IPR003890 GO:0003723|GO:0005515
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 406 433 - -
Glsi06g1381 1895 Pfam MA3 domain 1779 1877 IPR003891 -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 384 402 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1634 1681 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 539 605 - -
Glsi06g1381 1895 SUPERFAMILY ARM repeat 1778 1878 IPR016024 -
Glsi06g1381 1895 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 360 1878 IPR045208 GO:0003743
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 1326 1350 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 364 433 - -
Glsi06g1381 1895 Gene3D - 1777 1884 - -
Glsi06g1381 1895 MobiDBLite consensus disorder prediction 871 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1381 Glsi-ChrGlsi06 50977824 50988771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1381 1 843 Eukaryotic Initiation Factors Gene Family AT3G60240 34.354 4.46e-92 330