Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1369 ATGGCCTCCCCTTCTTCCCCTATTGACTCCACCCCTCCTCCAGACCCACCCACCGCCGTACCCCTCCCTCTTCCGGCGCCAACCTCCTCTCGCCGCCTGCCGCCGCCGTGCTGGTCTCACGATGAGACCGTCGCCCTCATCGACGCTTACAGGGACAAGTGGTATTCCCTAGGCCGTGGCAATCTCAAGGCAATCCACTGGCAAGAGGTAGCCGATGCGGTTACCAGCCTCTGCCCGAATGCCTTTCCGCCCAAAACCGCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAGCGCTACCGTACCGAGATCCAACGCGCCCGGACCTTGCCCATTGCTCGATTCAATTCCTCTTGGGTCCACTTCAATCGCATGGATTCCATGGAGAAGGGTCCCTCCCCAGTCAAACCTGAAAACAATTATGACAGCCCTGATGAAATTGACCGCGATGATGACGATGAGGATCAGGACTTGTACGAGGAATTCAAGAACAGTGGTGGCTCTAACACAAGGAGCTTGAATAAATTGTATAGAAACGGGATCGGCCCTGCCAGCGGCGGTGGCAGTGCAGGTGGGTTTCGGATACGGATTCCAGCTGGGGTAAGCATAGCGCAACCTGGGTCCAAGTTTTATGGGAAGGTTGCTGATCAGAAGTATAATCCCAATTCAAAATCTGCCCCTAGCTCCAATTGCAGTCCCAGTTGTGGGGCAAAGGTTTTAAAAGAGAGAAGTGGATTGGGGAAAAGAGAGAGGGAGAGGGAGAGAGACCCAGTCGAGGAGATGGTATCTGCAATCAAGGTTTTGGGAGATGGGTTTGTGAGGATGGAGCAAATGAAGATGGAGATGGCGAGGGAGATTGAAACTATGCGAATGGAGATGGAAATGAAGCGTACTGAAATGATTTTGGAGTCCCAGCAGCGGATTGTGGAGGCGTTTGCGAAGGCAGTTTCGGAGAAGACAAAGAGATTGCCATCACCTTCCGAACCATAG 993 0.5388 MASPSSPIDSTPPPDPPTAVPLPLPAPTSSRRLPPPCWSHDETVALIDAYRDKWYSLGRGNLKAIHWQEVADAVTSLCPNAFPPKTAVQCRHKMEKLRKRYRTEIQRARTLPIARFNSSWVHFNRMDSMEKGPSPVKPENNYDSPDEIDRDDDDEDQDLYEEFKNSGGSNTRSLNKLYRNGIGPASGGGSAGGFRIRIPAGVSIAQPGSKFYGKVADQKYNPNSKSAPSSNCSPSCGAKVLKERSGLGKRERERERDPVEEMVSAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKTKRLPSPSEP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1369 330 MobiDBLite consensus disorder prediction 127 154 - -
Glsi06g1369 330 SMART 118neu2 45 134 IPR006578 -
Glsi06g1369 330 MobiDBLite consensus disorder prediction 7 32 - -
Glsi06g1369 330 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Glsi06g1369 330 Gene3D - 38 103 - -
Glsi06g1369 330 FunFam Trihelix transcription factor ASIL2 38 103 - -
Glsi06g1369 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 318 IPR044823 -
Glsi06g1369 330 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1369 Glsi-ChrGlsi06 48757203 48758195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1369 37 129 Trihelix Transcription Factor Family AT3G14180 37.634 1.52e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi06g1369 Myb_DNA-bind_4 4.7e-20 CL0123