Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1360 ATGCTGTGGGAGGACTTAACCAACATGCTTGGAGCTACAAGCCTACTATTAGGCTCTCCCTGCATGTTGGAGCACGTAACGCTACCTGTGGAACTTGGGTTCCTAGCTATCTTGTTTATCCAACTTTTAGAAAGAGGCGTGCACCTGTTATGCAACCAGAAGAACAAGGTCTCAGATCAAGCCCCAGAGATTCATCCCACCGGAGTAAAATTCGGTTTTTCTTATAAAACCAGCATAATTTGCTCCACTTTACTGCTGGCCGTTCATATCTTAATGCTACTAATGATGCTCAATGGTGAGACTCAATGTAGCTATAAACTAGAGGCCTTTACATCAGAGATAGTTCTGGTATTATCATGGGTAATTACACTGATTGCAATATGCAAGATGCCAAAATTCTACACTAAATTCCCTTGGATGCTAAGAGCATGGTGGCTTTGCAGCTTCTTTTTGTGCATTATCAGTTTAGGCTTTCATACCCAATTTAGAGTCAGCAAACCCGGACAGTTTGGAATAAGGGAATATGTAGACTTACTTGGCCTACTCGCATCAACATGCCTATCGGGCATTTCAGTAAGAGGGAGAACAGGCATTAGCTTGATTGCCGCAAATGGCATCTCTGAACCACTTCTGAGTGAGAAAACTGGTCAACATTCAGAATGCAGAAGGGAATCTCCATATGGTAAAGCTACTCTTCTCCAACTCATTACCTTCTCCTGGCTCAATCCCTTGTTTGCAGTAGGGTATAAGAAACCCCTTGAACAAAATGAGGTTCCTGATGTTGACATCAAGGACTCTGCTGAATTTCTATCCTGCTCCTTTGATGAGAGCCTGAGACAGGTTAAAGAGAGAGATGAGACCATAAGCCCATCAATCTACAAGGCAATCTATCTATTTGCTAGGAAGAAGGCAGTAATAAATGCATGTTTTGCAATAATAAGTGCTGCCGCTTCTTATGTTGGCCCATACCTGATCACTGACTTTGTGAATTTCCTGGGGCAGAAGGGAATCCGTGGGTTGAAGGAAGGATACATATTGTCACTAGCATTTTTATGTGCCAAAATGATAGAGACAATAGCTCAGAGGCAATGGATTTTTGGAGCCCGCCAGTTAGGCCTTCGCCTTAGAGCTGCATTGATATCCCATATATATAAAAAAGGCTTAAACCTGTCGAGTAGATCGCGCCAAAGTCACACAGGAGGCGAGATAATGAACTATATGAGTGTAGATGTGCAGAGAATCACAGATTTCATGTGGTACATAAACATTATATGGATGCTGCCTATACAAGTTTCTTTAGCGGTCTACATTTTGCATACTAATCTAGGTTTAGGTTCATTGGCTGCTTTAGCTGCTACAATGATAGTTATGGCTTTGAACATACCTCTCACAAGAATACAGAAAAGATACCAATCTAAGATCATGGAGGCTAAGGACAGCAGGATGAAAGCCACTTCAGAAGTCCTCCGAAACATGAAGACTTTGAAACTACAAGCATGGGATAGTGAATTCCTTCACAGGATAGAAGAACTGAGGGCAATAGAGTACAATTGGTTATGGAAGTCATTAAGACAAGCTGCATTTTCTGCTTTTATCTTTTGGGGATCACCCACATTTATTTCTGTGATAACCTTTTGGGCATGTATCTTGATGGGTATTGAACTAACAGCAGGAAGAGTCTTATCTGCATTTGCCACATTCCGAATGTTACAGGATCCTATATTTAGCTTACCTGATTTACTCAATGTCATTGCTCAAGGAAAAGTTTCAGTAGACAGGATTGCTTCTTATCTCAGGGAAGAAGAAATTCAACAGGATGCCATTGAGTATGTTGCAAGGGATCAAACAGAGTTTGATATAGTTATTGAAAAAGGGAGATTCAGCTGGGATCCTGAGTCAAGCAGTTCAACCCTTGATGGAATAGAGTTAAAAGTCAAAAGAGGAATGAAGGTGGCAATTTGTGGCACTGTAGGTTCTGGAAAGTCTAGTCTGCTTTCGAGCATTTTGGGTGAAATATATAAACAGTCTGGGACTGTCAACATCAGTGGAACCAAAGCTTATGTTCCACAGTTACCATGGATATTGACTGGAAATATTAGAGAGAACATCACCTTTGGAAAGGAGTACAATAATGCCAAGTATGAGAAGACTATCGAAGCATGTGCATTGAAAAAGGACTTTGATCTATTCTCCTGTGGTGACCTCACAGAGATTGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGAATACAGATAGCTCGTTCAGTTTACCAGGATGCTGACATATATATTCTTGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGAACGCACCTCTTCAAGGAGTGCCTAATGGGGATTCTCAGTGAAAAAACTATACTTTATGTTACCCACCAAGTTGAGTTTCTTCCAGCAGCAGACCTCATTCTTGTGATGCAAAATGGAAGGATTGCACAAGCTGGAAAATTTGAAGAACTGCTAAAGCAAAATATAGGATTTGAAGTTTTAGTGGGAGCTCATTGCCAAGCTCTGGAGTCTATTCTTATGGTTGAAAACTCAAGTAGAACAACTCTGAATCCAACACCTGAAGGTGAATCTAACACTGATTCCAAGTCAAAGGCAGAACTTTTACACACACAACATGACATAGAGCAAGGTAGTTCCCCAGAGATCAAAGAAAAAGAAGGAAAATTGGTGCAAGATGAAGAATTAGAAAGAGGAAGGATTTCAAAAGAAGTTTACAAGACTTACTTGACCATTGTCAAAGGGGGAGCACTGGTTCCAGTCATACTCTTAGCCCAGTCTTCATTCCAAGGACTTCAGGTTGCCAGTAACTATTGGATGGTTTGGGTTTGTCCTACAACAAGTGAGGCTAAACCTACATTTGACATGAATTTCATACTAATTGTTTATATGCTACTTTCTGTCGGGAGTTCATTTTGTGTGCTGCTGCGTGCCATGTTAGTGGCTAGAACTGGACTTTGTACAGCACAGAAACTCTTTACCAACATGTTGCAGAGGGTAATCCGAGCACCCATGTCATTTTTTGATTCAACACCAACTGGAAGAATTTTGAATAGGGTCTCTACAGATCAAAGTGTGCTAGATTTGGAAATGGCAACTAAATTAGGATGGTGTGCTTTCTCAGTTATACAGATTCTAGGCACTGTTGCAGTGATGTCACAGGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACTGCAATCTGCGTATGGTATCAAAAATATTATACACCAACAGCAAGAGAACTAGCTCGCTTAGCACAAATACAAATAGCTCCGATTCTCCATCATTTTGCAGAATCACTGGCAGGAGCAGCATCAATTCGAGCCTTTGATCAAGAAGGTCGTTTTGTGTACACAAATCTTCGACTTGTGGACAACCACTCAAGGCCCTGGTTTCATAACGTATCTGCAATGGAGTGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTTTTTGCCTTCTCACTAGTTTTGCTGGTAATCCTTCCTGAAGGAATCATCAGCCCAAGCATTGCAGGGTTGGCAGTAACTTATGGAATCAATTTGAATGTCCTGCAAGCTTCAGTTATATGGAACATATGTAATGCGGAAAATAAGATTATATCTGTTGAGAGAATTCTTCAGTACTCAAATATCCCAAGTGAAGAGGCTCTTGTGGTAGAAGATTGCAGGCCCCCAAACAACTGGCCTGAAAATGGAACAATATGTTTCAAAAATTTGCAGATACGCTATGCTGAACATCTCCCATCTGTCCTGAAAAACATTACTTGCACATTTCCTGGAAGGAAGAAAATTGGTGTTGTTGGACGAACAGGGAGTGGAAAATCAACCCTTATACAAGCCATTTTCAGGATTGTTGAACCCAGAGAGGGAAGCATTATAATTGACGATGTGGACATATGCAAGGTCGGTCTCCATGACATAAGGTTGAGGCTTAGCATCATTCCACAGGATCCGGCAATGTTTGAAGGCACAATTAGAGGAAACCTGGACCCACTGCAGCAATACTCTGACGATGAAGTTTGGGAGGCTCTAGATAAATGTCAGCTTGGTCAACTGGTGAGAACAAAGGAAGAGAAATTGGATTCCTCAGTGGTTGAAAATGGAGATAACTGGAGCGCAGGCCAAAGGCAATTATTTTGCCTTGGAAGAGCCCTACTGAAGAAAAGTAGCATACTTGTGCTGGATGAAGCGACAGCATCAGTGGATTCTGCAACTGATGGAGTGATACAGAAGATCATTAGTCAAGAGTTTAAAGATAGGACTGTTGTCACAATAGCTCATCGAATTCATACCGTTATTGGTAGCGATTTGGTTTTGGTTATGAGCGATGGGAGAATCGTAGAGTATGATGCTCCATCAAAGTTGCTTGAAAGAGAAGATTCCTTCTTCTCGAAACTGATAAGGGAGTACTCTAGAAGATCACAAAGTTTCAACAACTTGACGCCTCAACATGTCCAAAGCATTGAATGA 4518 0.4121 MLWEDLTNMLGATSLLLGSPCMLEHVTLPVELGFLAILFIQLLERGVHLLCNQKNKVSDQAPEIHPTGVKFGFSYKTSIICSTLLLAVHILMLLMMLNGETQCSYKLEAFTSEIVLVLSWVITLIAICKMPKFYTKFPWMLRAWWLCSFFLCIISLGFHTQFRVSKPGQFGIREYVDLLGLLASTCLSGISVRGRTGISLIAANGISEPLLSEKTGQHSECRRESPYGKATLLQLITFSWLNPLFAVGYKKPLEQNEVPDVDIKDSAEFLSCSFDESLRQVKERDETISPSIYKAIYLFARKKAVINACFAIISAAASYVGPYLITDFVNFLGQKGIRGLKEGYILSLAFLCAKMIETIAQRQWIFGARQLGLRLRAALISHIYKKGLNLSSRSRQSHTGGEIMNYMSVDVQRITDFMWYINIIWMLPIQVSLAVYILHTNLGLGSLAALAATMIVMALNIPLTRIQKRYQSKIMEAKDSRMKATSEVLRNMKTLKLQAWDSEFLHRIEELRAIEYNWLWKSLRQAAFSAFIFWGSPTFISVITFWACILMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSVDRIASYLREEEIQQDAIEYVARDQTEFDIVIEKGRFSWDPESSSSTLDGIELKVKRGMKVAICGTVGSGKSSLLSSILGEIYKQSGTVNISGTKAYVPQLPWILTGNIRENITFGKEYNNAKYEKTIEACALKKDFDLFSCGDLTEIGERGINMSGGQKQRIQIARSVYQDADIYILDDPFSAVDAHTGTHLFKECLMGILSEKTILYVTHQVEFLPAADLILVMQNGRIAQAGKFEELLKQNIGFEVLVGAHCQALESILMVENSSRTTLNPTPEGESNTDSKSKAELLHTQHDIEQGSSPEIKEKEGKLVQDEELERGRISKEVYKTYLTIVKGGALVPVILLAQSSFQGLQVASNYWMVWVCPTTSEAKPTFDMNFILIVYMLLSVGSSFCVLLRAMLVARTGLCTAQKLFTNMLQRVIRAPMSFFDSTPTGRILNRVSTDQSVLDLEMATKLGWCAFSVIQILGTVAVMSQVAWQVFVIFIPVTAICVWYQKYYTPTARELARLAQIQIAPILHHFAESLAGAASIRAFDQEGRFVYTNLRLVDNHSRPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVILPEGIISPSIAGLAVTYGINLNVLQASVIWNICNAENKIISVERILQYSNIPSEEALVVEDCRPPNNWPENGTICFKNLQIRYAEHLPSVLKNITCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPREGSIIIDDVDICKVGLHDIRLRLSIIPQDPAMFEGTIRGNLDPLQQYSDDEVWEALDKCQLGQLVRTKEEKLDSSVVENGDNWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIGSDLVLVMSDGRIVEYDAPSKLLEREDSFFSKLIREYSRRSQSFNNLTPQHVQSIE 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1360 1505 ProSitePatterns ABC transporters family signature. 745 759 IPR017871 GO:0005524|GO:0016887
Glsi06g1360 1505 Pfam ABC transporter 638 772 IPR003439 GO:0005524
Glsi06g1360 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 305 586 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi06g1360 1505 Gene3D - 1233 1486 IPR027417 -
Glsi06g1360 1505 Pfam ABC transporter 1267 1415 IPR003439 GO:0005524
Glsi06g1360 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 836 IPR027417 -
Glsi06g1360 1505 CDD ABC_6TM_ABCC_D2 931 1225 IPR044726 GO:0140359
Glsi06g1360 1505 Coils Coil 1501 1505 - -
Glsi06g1360 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1242 1480 IPR027417 -
Glsi06g1360 1505 SMART AAA_5 647 820 IPR003593 GO:0016887
Glsi06g1360 1505 SMART AAA_5 1276 1468 IPR003593 GO:0016887
Glsi06g1360 1505 FunFam ABC transporter C family member 10 288 602 - -
Glsi06g1360 1505 FunFam ABC transporter C family member 3 1233 1485 - -
Glsi06g1360 1505 FunFam ABC transporter C family member 5 605 852 - -
Glsi06g1360 1505 Gene3D - 615 844 IPR027417 -
Glsi06g1360 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1252 1484 IPR003439 GO:0005524
Glsi06g1360 1505 Pfam ABC transporter transmembrane region 306 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi06g1360 1505 Pfam ABC transporter transmembrane region 947 1177 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi06g1360 1505 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1487 - -
Glsi06g1360 1505 CDD ABC_6TM_ABCC_D1 306 594 IPR044746 GO:0140359
Glsi06g1360 1505 Gene3D ABC transporter type 1, transmembrane domain 897 1232 IPR036640 GO:0005524|GO:0016020
Glsi06g1360 1505 Gene3D ABC transporter type 1, transmembrane domain 281 604 IPR036640 GO:0005524|GO:0016020
Glsi06g1360 1505 SUPERFAMILY ABC transporter transmembrane region 935 1230 IPR036640 GO:0005524|GO:0016020
Glsi06g1360 1505 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 843 IPR003439 GO:0005524
Glsi06g1360 1505 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 933 1213 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi06g1360 1505 CDD ABCC_MRP_domain1 620 820 - -
Glsi06g1360 1505 SUPERFAMILY ABC transporter transmembrane region 301 602 IPR036640 GO:0005524|GO:0016020
Glsi06g1360 1505 FunFam ABC transporter C family member 5 894 1231 - -
Glsi06g1360 1505 CDD ABCC_MRP_domain2 1248 1468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1360 Glsi-ChrGlsi06 44826963 44862873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1360 627 865 Calmodulin-binding Proteins AT2G36910 28.235 3.72e-21 99.0