Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1344 ATGCCCGTAGAGCGTCCGAAATCATCTGGGTCGAATTGCCCAATACGTTCTGCTTCCACCTATAGAACGCTTGAGAGGAACCAGAAAGCAACAAGGTGTTTGCGTATTGGGAGGAAAACTTGGTTTGCGTATCTTGCCATTGCAGAGCCATGGCCGAAGGTTTCTGGTTTCGCAAAGGTGGACCTGATCACTAGAGAAGTGAAGAAGTACAAATATGGACTCGCCAAGTCTGCCAATGAAGTACTTTTGGTCATTGAGGCTTACAAAGCTCTACGTGATCGAGCACCTTACCCTGCCAATCACGTTGTTGGCCATCTTAGTGGGAGTTTTGCTTTCATAGTTTTTGACAAGTCCACTTCTACCCTCTCTGTGGCTTCAGTTCCTCTGTATTGGGGAATAACAACTAATGGATATGTATCATTTGCTGATGATGCAAAATTACTTAAAGGTGCTTGTGGCAAGTCTCTTGCCTCTTTCCCTCAAGGTGGGTTTACTTCTAAGTTTTACGTGCTTACGTATGTCTGATGTTTCTACTCCACGACAGTTGGGGGATTGAGATGCTATGAGAATCCTAAGAGTAAGGTAACTGCAGTACCTGCTAAGGATGAGGAAATCTGTGGTGCAACCTTCAAGTTAAAGGAAATTATGGCTGATTTTGGGTTTGAACCTAATCACACAATGGGTATTGTAGATAAAGAGAAGTCATGGTATCTACTAGCAATTTTGCTGAATATTGGTCGCTCGCTTTGTCCTGAAGAGCTTGCTTCTCAATGTAAATTATTCACTGCATCGCCAGATGTTATTTGGTTCATAAGTTCGGCTTCTGTTTCTCCTCTTCATTTGATGGAAAATGGACTTGTTACGGTTTCTGTGGCTGCCATTTTCACTGTTGAGAAGTTTGTCTCAATTGCAATGAATCGAGGGTTTGTGTCGAGATATGGGTTTTGGGCTTCAGAGCCTAAGAAATCAAGATATACTGATCTGAAGACGTATTTCAGAAAGCGGAAGGGAACAATGCTGGATAAGAATGAATCATCTACTCCTAAAAGGAGGTTATTATTACCAGTCGCAGAAGGTGAAAGAGAACAGAATAGATTACCAATCTTCGATGGGATTGAAGACATTTCATTAGCGGAATATGTTGAAACTTTTAATGTTACGATGAGAAGAACTTTATTTTCAGTAAAATTTGAACCTGAACATATGCATAGCGGGAGAGCTATGATCCCCTTGCATCTTGATACAACTGGTAGAAGTTGTGGTTGTTCAAAACCGAAGGTTGAATCTAGGGAAACTGATAACAATGCCAGGACAGACATGTTTCTTCAAGGAGAGATTTCTGGAACTGTATATAAGTCTAGTGATAGATTTTTCAAAAGTGGAGGAGATCTGAATTGTCAGAAGCCAGTGGAATTAGATAGATTCATGGAATGCAAGATTGATGTCAAATCTGCTCTGCCAGCTAGTTTCCAAGATCCCTTGCTATGTGAGGAAGCCCTTGTTGGTGACATTAGATTCGGGAATAAAGTAGATTACTCTAATAGTAATATATTTTGTCATGAAGATCATGAGCAAAACATTATTCATCCAGTGTATGATAGTAGTAAAAGTCATACTTGCAAAGCTTCAATGAAGGAATCTAATGAAGTAGAAGGAATGCAAGTAGAAAATGGTTCAAAGGAAGGGTTTATTGGTTATGAAGCAGAAATTGAGAAGGTAAATGTTGCTATGATGGTCAAGCTTGCGCCATGTGGAGAGCTAAGAAATGATCAATGTAAAAATGGTCAGGAATTTATTGCAAGTCACAAACTATTGCAAAGACATAACTCCAATGTGCATACTAAAGAAAACATAGTAGAAACTACATCCATGACTCCTAAGGTGGAGAAAAAAACATATCCATCCTTTGAAACTTTTACTATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTATTGTGCTCGAAGGAAGAATGATGGGAAAAGACTTGCAATAAAATGTCCAGATGGTAGTGCTCATAAAAACCATATAAATAATGAGCAGATTATGCTTGAGCGTTTTGGGGGTAGAAATTTCATAATAAAATTTGAAGGATCTTTTAAAAGTGATAATGGTGACTGCTTTGTTTTGGAACATGTTGAGCATGACAGACCTGAGGTTTTGAAAAAAGAAATTGATATATTTCACTTTCGGTGGTATGGTTATTGCTTGTTCAGAGCCCTTGCATTCTTGCACAAAGAGGGAGTTGTTCACCGAGATGTCAAGCCTGGAAACTTCCTCTTCTTTCAGAAGCTAAACAAAGGCTATCTGATTGATTTTAACCTGGCCATGGTTAGGCATGTGAAGCAAAAGGATTATGATGGTTCTCTGAAAAATTGTCCCGATAAGGCTGGTGGGAATTTACATAGAGCACAAGGAACCAATGGCTTGGATCTATGTTTCAGGGACCTAAGGAATATAAAAGACATTGCTAAATTGAGGGGCAGTGAAGATCTTTGGGAAGTGGCCAAGTTACATGACCGTGAATTATCTCTTCCAGTGGAGTTATATGATGAACAGTACTTGCAATCGTTGGACCTAGAAAGCTGGTGCAGGATTCACACAAAGAGATTTGATTTTCTTAAGCACATCCCAAAATCACTATTTGATCTGGTAAATAAATGTCTGACAGTAAATCCAAGAAACAGGATTAGTGCTGAGGAAGCTCTCAAGCATGAATTCTTCGCCTCATGCCATGAGAAGCTGAGAAAGCAAAGGATGATTCAGCAAGGTCTATGCTTGAATTCTGCAGCTATCCAGAGTAATCATGTAGATGAGCTATGCTAA 2832 0.3962 MPVERPKSSGSNCPIRSASTYRTLERNQKATRCLRIGRKTWFAYLAIAEPWPKVSGFAKVDLITREVKKYKYGLAKSANEVLLVIEAYKALRDRAPYPANHVVGHLSGSFAFIVFDKSTSTLSVASVPLYWGITTNGYVSFADDAKLLKGACGKSLASFPQGGFTSKFYVLTYVXCFYSTTVGGLRCYENPKSKVTAVPAKDEEICGATFKLKEIMADFGFEPNHTMGIVDKEKSWYLLAILLNIGRSLCPEELASQCKLFTASPDVIWFISSASVSPLHLMENGLVTVSVAAIFTVEKFVSIAMNRGFVSRYGFWASEPKKSRYTDLKTYFRKRKGTMLDKNESSTPKRRLLLPVAEGEREQNRLPIFDGIEDISLAEYVETFNVTMRRTLFSVKFEPEHMHSGRAMIPLHLDTTGRSCGCSKPKVESRETDNNARTDMFLQGEISGTVYKSSDRFFKSGGDLNCQKPVELDRFMECKIDVKSALPASFQDPLLCEEALVGDIRFGNKVDYSNSNIFCHEDHEQNIIHPVYDSSKSHTCKASMKESNEVEGMQVENGSKEGFIGYEAEIEKVNVAMMVKLAPCGELRNDQCKNGQEFIASHKLLQRHNSNVHTKENIVETTSMTPKVEKKTYPSFETFTIEEEEGSGGYGTVYCARRKNDGKRLAIKCPDGSAHKNHINNEQIMLERFGGRNFIIKFEGSFKSDNGDCFVLEHVEHDRPEVLKKEIDIFHFRWYGYCLFRALAFLHKEGVVHRDVKPGNFLFFQKLNKGYLIDFNLAMVRHVKQKDYDGSLKNCPDKAGGNLHRAQGTNGLDLCFRDLRNIKDIAKLRGSEDLWEVAKLHDRELSLPVELYDEQYLQSLDLESWCRIHTKRFDFLKHIPKSLFDLVNKCLTVNPRNRISAEEALKHEFFASCHEKLRKQRMIQQGLCLNSAAIQSNHVDELC 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1344 943 Gene3D Transferase(Phosphotransferase) domain 1 715 784 - -
Glsi06g1344 943 Pfam Protein kinase domain 641 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1344 943 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 62 170 IPR029055 -
Glsi06g1344 943 Gene3D Transferase(Phosphotransferase) domain 1 813 934 - -
Glsi06g1344 943 SMART DUF3700_2 4 212 IPR024286 -
Glsi06g1344 943 Gene3D Phosphorylase Kinase; domain 1 640 714 - -
Glsi06g1344 943 PANTHER ALUMINUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS 70 214 IPR044828 -
Glsi06g1344 943 SMART serkin_6 639 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi06g1344 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Glsi06g1344 943 FunFam Probable serine/threonine-protein kinase DDB_G0291918 631 791 - -
Glsi06g1344 943 SUPERFAMILY Protein kinase-like (PK-like) 629 914 IPR011009 -
Glsi06g1344 943 Pfam Aluminium induced protein 69 211 IPR024286 -
Glsi06g1344 943 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 83 164 IPR029055 -
Glsi06g1344 943 ProSiteProfiles Protein kinase domain profile. 639 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1344 Glsi-ChrGlsi06 38146989 38168950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1344 643 910 Core Cell Cycle Gene Families AT3G48750 24.595 1.23e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Glsi06g1344 Pkinase 2.6e-21 CL0016