Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1331 ATGGCCGGCCTAGACTTGGGTTCAGCATCCCACTTTGTTCATCAACTTCAACGCCCTGACCGTCAATCCAACGAAGAAGATGAGAACCAAGGTCATGATTATAATAACCTTCCAGGGCTTGATCTTGTCACACCAAACCCAGCTGGTTCCGGTGATGTTGTGGCTCGTAGGCCAAGGGGTAGACCTGCCGGATCCAAGAACAAGCCAAAACCGCCGGTGATCATTACCCGGGAGAGCGCCAACACGCTTCGAGCTCATATCCTTGAAGTGAGCAGTGGCTTCGATGTGTTTGATTCTGTGGCTAATTACGCAAGAAAGCGACAGCGCGGGATCTGTGTCCTGAGCGGCAGCGGCACTGTCACCAACGTCACGTTGAGGCAGCCGGCGGCGGCTGGGGCTGTAGGGACGCTGCACGGGCGGTTTGAGATACTGTCGTTGTCAGGGTCATTTTTGCCACCTCCAGCTCCACCTGGTGCGACAAGCCTGACTATATTCCTGGCCGGAGGTCAAGGTCAAGTTGTTGGAGGAAACGTTGTTGGTCCTTTGGTAGCTTCTGGGCCTGTTATTGTTATTGGTTCATCATTTACCAACGTAGCATATGAGAGGCTGCCCTTAGATGAAGAGGAATCTTTACAGATGCAGCAAGACCAATCATCTGGCGGTGGCGGTGAAGGGAGTGGAGGAGGTGGAGTCAACAACGCGTTACCGGATCCATCTTCTGGGCTTCCCTTCTTCAATCTGCCACTAAACATGCCACAGTTACCCGTTGATGGCTGGGCTGGAAACTCAGGCAGAAGGCAAACATACTGA 810 0.5309 MAGLDLGSASHFVHQLQRPDRQSNEEDENQGHDYNNLPGLDLVTPNPAGSGDVVARRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVSSGFDVFDSVANYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVGTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGPLVASGPVIVIGSSFTNVAYERLPLDEEESLQMQQDQSSGGGGEGSGGGGVNNALPDPSSGLPFFNLPLNMPQLPVDGWAGNSGRRQTY 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1331 269 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Glsi06g1331 269 PIRSF ESCAROLA 4 263 IPR014476 GO:0003680
Glsi06g1331 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 196 IPR005175 -
Glsi06g1331 269 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Glsi06g1331 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 224 IPR014476 GO:0003680
Glsi06g1331 269 MobiDBLite consensus disorder prediction 18 32 - -
Glsi06g1331 269 MobiDBLite consensus disorder prediction 1 73 - -
Glsi06g1331 269 MobiDBLite consensus disorder prediction 208 246 - -
Glsi06g1331 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 211 - -
Glsi06g1331 269 CDD DUF296 84 167 IPR005175 -
Glsi06g1331 269 Gene3D - 83 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1331 Glsi-ChrGlsi06 34153481 34154290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1331 1 262 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.189 2.27e-94 278