Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1280 ATGGAAAGTGATGCTCACTCTGAGGACAACTTTGGCACATCCGCTTTCTCCACCTTCACCACCATCCCCACCAACTCCACCATCACCAACACCACATCTTCCTCCTCCTCTTCATCTTCATTAACAGTAGTAGCAACATCTACTTCAAACTCAAATTCAGGTACCAAGAAAGACTCAAAAAGTGCTTCAAATGGCTCAACCAGAGCTGATCAAGATTTGGAAAATGACAAGGAGTGCAAGAAGAGGCAGCGATGTGAGAATGATGGAAACAAGCACCTAACATACAGAGGAGTAAGAATGAGAAATTGGGGAAAATGGGTGTCTGAGATCCGTGAGCCAAGAAAGAAGTCAAGAATATGGCTTGGAACATACCCTACTGCAGAAATGGCAGCTAGAGCCCATGATGTAGCCGCCTTAGCCATCAAAGGTCATTCAGCTTACCTCAATTTCCCTGAATTGGCTAAAGAGCTTCCCCGGCCCGTCAGCACATCTCCTAAGGACATCCAAGCTGCGGCTGCAAAGGCTGCAGCCACTGTATTTGAGGAGGCTAAACATTGTCATACTGAAGCCGGGCCAAGCCAAGCAGAGCAGGCTTCATATTCAACTCTATCCATGGACACTAATATTCATGAGTCTTCGAGTTCCCCCTCTACTAATAACGATGATGACACTTTGTTTGACCTACCGGATCTTTTCACTGATGGAAACAATGGTCCGTGCTCCTTTTCTTCTTCATGGCATTTATGTGCAGTTGACAGTGGTTTCCGGCTTGAGGAGCCATTTTTGTGGGGGAACTACTAG 801 0.4632 MESDAHSEDNFGTSAFSTFTTIPTNSTITNTTSSSSSSSSLTVVATSTSNSNSGTKKDSKSASNGSTRADQDLENDKECKKRQRCENDGNKHLTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAKELPRPVSTSPKDIQAAAAKAAATVFEEAKHCHTEAGPSQAEQASYSTLSMDTNIHESSSSPSTNNDDDTLFDLPDLFTDGNNGPCSFSSSWHLCAVDSGFRLEEPFLWGNY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1280 266 FunFam Ethylene-responsive transcription factor 2 93 152 - -
Glsi06g1280 266 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Glsi06g1280 266 MobiDBLite consensus disorder prediction 1 84 - -
Glsi06g1280 266 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 56 234 - -
Glsi06g1280 266 MobiDBLite consensus disorder prediction 8 69 - -
Glsi06g1280 266 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Glsi06g1280 266 CDD AP2 95 153 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Glsi06g1280 266 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1280 Glsi-ChrGlsi06 24001408 24002208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1280 82 262 AP2-EREBP Transcription Factor Family AT2G44940 56.311 7.49e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi06g1280 AP2 6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1280 06 24001408 24002208 Glsi06g1280 06 24001408 24002208 ECH