Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1272 ATGCAGATTAAAAGATATGAGGAAATGGCATGCAAGCTATGGTTTTTTAAGGAACAAATGGCAAAGGCTGGTGTATCACCCTCAACAAGGTCAATAACTGATAAAGTTGATCTAGACAATTTGGAGGTTAAACTTGTAGAACTTGAAGTTGAGCTAATTGAGATTAATGCAAATAATGATAAGTTGCAACACAGTTATAGTGAGTTGTTAGAATATAAACTTGTTCTCGAGAAGGTATTTTCAACACTCCCCTTGGTTGAATTAGGCTGCTTAAGTCAAAGTGGGCATTTCATTGCAAGTTGGCTACAATATGTTATTTGCTAG 324 0.3549 MQIKRYEEMACKLWFFKEQMAKAGVSPSTRSITDKVDLDNLEVKLVELEVELIEINANNDKLQHSYSELLEYKLVLEKVFSTLPLVELGCLSQSGHFIASWLQYVIC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1272 107 PANTHER VACUOLAR PROTON ATPASES 2 80 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi06g1272 107 Coils Coil 38 65 - -
Glsi06g1272 107 Pfam V-type ATPase 116kDa subunit family 2 79 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1272 Glsi-ChrGlsi06 23408665 23410161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1272 2 79 Primary Pumps ATPases(2) AT4G39080 62.025 5.71e-25 95.9