Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi06g1264 | ATGTATAGGAAGATTGGCAAAGCAGAATTTAAATGCCCTGATTGGATCTCACCAGAAGCACGCAGACTAGTATGCAAGATATTGGAACCAGATCCTGATACTAGGATTTCCATAGCTATGATTAAGGAATGTTCTTGGTTCAAGACAAGACCAAATGCTAGGCATAAAAAACCTAAAGTGGAAAAAAAGACTGTCTCGTTGTTAGGCAACAACCCTTCTGATCAAAGCAATGAAACTGATAGTGACAGTATAGCTGTAGAAGCAAGGGAAGAGTCATTTGTGCCCACCAGTATAAATGCATTTGATATTATCTCCCTTTCGGCTGGTTTTAATCTTTCTGGATTCTTCAGTGACAGTTTTCAGAAGAGAAAAGCAAGATTTGCTTCAAGAAAACTTGCATCAGTAATCATCTCTAAGCTGGAAGAAACTGCTAATAGTCTAAAGCTAAAAATAAAGAAGAAAGCAGCAAGTTTGTTACAATTAGAGGGCTTCAAGGAAGGTAGGAAGGGCAATTTATCCATTGATGCAGAGATCTTTGACGTTACTCCATATTTCCATTTGGTGGAAGTGAAAAAATCAGTGGAGATATATTAG | 594 | 0.3771 | MYRKIGKAEFKCPDWISPEARRLVCKILEPDPDTRISIAMIKECSWFKTRPNARHKKPKVEKKTVSLLGNNPSDQSNETDSDSIAVEAREESFVPTSINAFDIISLSAGFNLSGFFSDSFQKRKARFASRKLASVIISKLEETANSLKLKIKKKAASLLQLEGFKEGRKGNLSIDAEIFDVTPYFHLVEVKKSVEIY | 197 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi06g1264 | 197 | Pfam | NAF domain | 95 | 153 | IPR004041 | GO:0007165 | |
| Glsi06g1264 | 197 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 96 | - | - | |
| Glsi06g1264 | 197 | MobiDBLite | consensus disorder prediction | 58 | 82 | - | - | |
| Glsi06g1264 | 197 | Coils | Coil | 137 | 157 | - | - | |
| Glsi06g1264 | 197 | FunFam | Non-specific serine/threonine protein kinase | 94 | 195 | - | - | |
| Glsi06g1264 | 197 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 1 | 193 | - | - | |
| Glsi06g1264 | 197 | Gene3D | Kinase associated domain 1, KA1 | 97 | 195 | - | - | |
| Glsi06g1264 | 197 | ProSiteProfiles | NAF domain profile. | 93 | 117 | IPR018451 | GO:0007165 | |
| Glsi06g1264 | 197 | MobiDBLite | consensus disorder prediction | 66 | 82 | - | - | |
| Glsi06g1264 | 197 | CDD | CIPK_C | 99 | 193 | - | - | |
| Glsi06g1264 | 197 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 52 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi06g1264 | Glsi-ChrGlsi06 | 22810735 | 22811328 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi06g1264 | 1 | 193 | CBL-interacting serine-threonine protein kinases | AT5G58380 | 52.217 | 9.65e-64 | 202 |