Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1259 ATGTTCTCCAACTTGTTTTCCACTTTTTTCATCCACTATGTTTCCACCACCACAAGGAAGATTTCGAAACTCTCAAATATTCCTACCAGGTACAGGAACATCGCTGTCCGAGAAGCTCAGAAGGTCCTCACTGATTACCTCCATGACACTAGGGGCTTGCCCTTTGTATACGCGGAGCAGATTGGCAAGAACTCCGACCTTTCCCTCACTAATCTAATTGAGAAAGTAGACTTTTCGGCCTCCACATTCTCCAAAAACATTACGAAATACCTCAGGTACCACCCTATCAACGAGTTTGAATTTTTCTTTGAAAGCATAGGCATAGACCACGATGGCATTTCTGGGTTGTTGCCTGCGAACAAGCTCTTCTTTTCCGAAGATGGGTCTGTTTTTTATGCAGCTTGTGCCCTTTCAGGATTTGGGTTTCCATGGGATAAATTGGGTAAGTTATATAAGGAGAGGAGTTCCATTTTTAGGAGAAGTCCGGAAGAGTTGAAGTCTAAGCTTTGTGAGTTTAAGAAATATGGGTTTGGAAACGTTGAAGTGATCGGTATATGCTTAGCTTTCCCTTATGTCTTGAGTGAGGAAGGCGAAGTAGGTGGTGAAATTGATGCGTTGTTCACTGTTCTGAAGTCAATATTTTTAGATTTTGAGTTGGCAAGATTTGTTGATGGAAATGTAGATTCTTGGCATGAGGTCTGTAGAAAAATTCGAGTGTTTTACGATTTACATGGGGAGAAGGGAAAGTTAGGGGAGCTTATGGGAAGGGCAAAAAACATTTTTCTTGAACATGGAGAAGAGGAGTTGATTCGGAAGGCAGAGTATTTCTGTAGATTTGGTGTCAGAAAGGAGGAAGTAGCTCTGTTACTTCTACAGGGCCCAGAATGGTTGAATCTTGATTTGCAGATGCCAGTGATTTCTGTATGGAAGCTATTGAAACACTTTGGCTTAAGCTCTAAAAATCTGAAGGCTGTCTGTAAAAAATATCCATATGTATTTGGAACAAACAAAATGGCTAATCTGCCTAATGTAATGAGGGCTTTGGATTTACATGAGTGGTTCTTCAATAAGAACAAGGATGGAAATAATCAACTGTTAACGAGTTATTTTGCAAGCTATCCTAATGAAGACCAAGATAAAGAATATCGTGATGGCTTAGAGATGATTCATGTTTTAAGATCCCGAAATCTTAGAATGAGTAAATTGAATTTCTTGCATGGCTTGGGCTTTGGAGAAAATGCTTTGACTATGAATGTATTAACTCACTTGCATGGCTATAGTAGTGAGTTACAGGAAAGATTTGATTGCCTTCTCCATTCAGGGTTTGAATTCTCCAAGCTTTGTATGATGGTGAAGAAGGCACCTAAGATTCTAAATCAAAACCCTGAAATTATAGATCAAAAGGTGAATTTTCTTTGTCAGGAAATGGGAATGCCATTACAGTGTCTGGTCACTATTGCTGCAGTTTTGTATTATAATTTAGAGACCCGCATTAAGCCTAGGTCCAGATTCTATATGTGGCTTAAAGAAAAGGGTCTGTGGAGGAAACATTATTCCATTGTGACCGTGATTGCAGCCAGCGAAAAGAATTTTGTAGCTTGGGTTTTTAAAATTCACCCAGCTGCTCCAAAACATTGGTTTGAGCAATTCTATATAACAGCAAACAGCTAG 1671 0.395 MFSNLFSTFFIHYVSTTTRKISKLSNIPTRYRNIAVREAQKVLTDYLHDTRGLPFVYAEQIGKNSDLSLTNLIEKVDFSASTFSKNITKYLRYHPINEFEFFFESIGIDHDGISGLLPANKLFFSEDGSVFYAACALSGFGFPWDKLGKLYKERSSIFRRSPEELKSKLCEFKKYGFGNVEVIGICLAFPYVLSEEGEVGGEIDALFTVLKSIFLDFELARFVDGNVDSWHEVCRKIRVFYDLHGEKGKLGELMGRAKNIFLEHGEEELIRKAEYFCRFGVRKEEVALLLLQGPEWLNLDLQMPVISVWKLLKHFGLSSKNLKAVCKKYPYVFGTNKMANLPNVMRALDLHEWFFNKNKDGNNQLLTSYFASYPNEDQDKEYRDGLEMIHVLRSRNLRMSKLNFLHGLGFGENALTMNVLTHLHGYSSELQERFDCLLHSGFEFSKLCMMVKKAPKILNQNPEIIDQKVNFLCQEMGMPLQCLVTIAAVLYYNLETRIKPRSRFYMWLKEKGLWRKHYSIVTVIAASEKNFVAWVFKIHPAAPKHWFEQFYITANS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1259 556 Pfam mTERF 427 531 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 Pfam mTERF 137 346 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 PANTHER CGI-12 PROTEIN-RELATED 44 537 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 SMART mt_12 480 514 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 SMART mt_12 287 318 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 SMART mt_12 148 178 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 SMART mt_12 448 479 IPR003690 GO:0003690|GO:0006355
Glsi06g1259 556 Gene3D Transcription termination factor 3, mitochondrial 386 550 IPR038538 -
Glsi06g1259 556 Gene3D Transcription termination factor 3, mitochondrial 226 375 IPR038538 -
Glsi06g1259 556 Gene3D Transcription termination factor 3, mitochondrial 69 217 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1259 Glsi-ChrGlsi06 22545604 22547274 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi06g1259 mTERF 9.3e-12 No_clan