Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1253 ATGCTTCGATTGAGGCCTGTTTATGTAATTGTGATCGAGGTCGTTTTGGGGCTTCTGGGTTTTATAATATATAATCTCTGTATAGAAGAAAATTATGATCCAGCACACTTTTATGGTCATGTGGAGGAATATCTTTTTGATGACAACCATGTACCATATTTTGAAATGCTGAAGACCTTCTGCGAGATTGTGCATTCATGGCTCTCCAGCATCCCAAAAAATATTGCTGTCATTCATTGCATGGCAGCGAAGGGTAGAACTGGCTTAATGGTGTGTGTATACCTAGTTTACAGTGGCATGTCAGCAGATGAGGCTCTTCAATTGTTTGTCGATAGACGGACAACGAATATTGAAGGAGGGCTTCGGTATTGGACCAGCAACAGTGAACTTGCCTCAACCATGAAGCAGAGAATTGCGGCGAATCTGCCTCTATGA 435 0.4207 MLRLRPVYVIVIEVVLGLLGFIIYNLCIEENYDPAHFYGHVEEYLFDDNHVPYFEMLKTFCEIVHSWLSSIPKNIAVIHCMAAKGRTGLMVCVYLVYSGMSADEALQLFVDRRTTNIEGGLRYWTSNSELASTMKQRIAANLPL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1253 144 Gene3D Protein tyrosine phosphatase superfamily 19 141 IPR029021 -
Glsi06g1253 144 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 58 124 IPR000387 GO:0016311|GO:0016791
Glsi06g1253 144 ProSiteProfiles Phosphatase tensin-type domain profile. 1 134 IPR029023 -
Glsi06g1253 144 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 21 119 - -
Glsi06g1253 144 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 118 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1253 Glsi-ChrGlsi06 22320774 22323389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1253 3 119 Protein tyrosine phosphatase (PTP) family AT5G39400 59.350 1.49e-46 154