Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1220 ATGGTACCTCTTCATACCAAGCAGAGGACACCTAAGTTTCCTCTTTATCATACACAGAGTCTCCATATTCTCATGATGTATAACAGCATGATTCTTCAATCTTCCTCTCTGGTGTTTAGAGTGCAAAGGTGCAAACCAGAGCTGGTGGCTCCGGCTAAGTCGACTCCTCAAGAATTAAAACCACTCTCTGACATTGATGACCAAGATGGTCTGCGTTTCCAAATTCCATTCATACTCTTCTATCCTTACCAGCCATCAATGGCAGGGAAAGACCATGTTCAAGTCATCAGAAAGGGACTAGCACAAACACTAGTGTTTTACTACCCATTTGCAGGTAGGCTTCGGGAAGGTCCTGGTCGCAAACTTATGGTAGATTGTAACGGGAAGGGAGTTCTGTTCATTGAGGCTGATGCAGATGTCACGCTTCCCCAATTTGGTGATGCTCTTCATCCTCCATTTCCTTACTTCGAAGAACTCCTTCATGATGTTCCTGGTTCTGAAGGAATCATCAACTGTCCCCTCCTGCTCATACAGGCAACACGCCTCAAGTGCGGTGGTTTAATCTTAGCTCTCCGACTGAACCACGCCATGAGCGACAGATCTAGTCTTGTTCAATTCTTGAAGGCCATGGCCCAAATAGTCAAGGGAGCTTCAAAACCTTCTTCCATTCTCCCGATAGCCGCCCTCCTCCGTCTGGTTCCCCACCACCTTGCTCAGTCCACTACCATTTTTGAGGTCCTCACAGCATGCCTGTGGCATTGCCGCACAAGAGCATTGCACCCACCACCGGAAGAGGAGGTGCGCCTGATGTGCCCCGTTAGTGTACACACCAAGTTGAAGCCTCCATTGCCAGTGGACTACAACGGCAATGGGGTTGTGTATGGTGGGCCAGCCAAGGGTGGGACCACTCTCGTTCCTGAAATGACAAGCCTTTACATAACATTTGAAAAGGCCAATGGAGAGAAAGGCACAGCGGTATCAGTTAGCTTGCCAGCTCAAGCCATGGAGAGGTTTGAAGGAGAGTTGGATGAGATGCTCATGAGCCATGCACTACCATGTGCTCCTCAAACCATATCTTCCCTCTAA 1086 0.4862 MVPLHTKQRTPKFPLYHTQSLHILMMYNSMILQSSSLVFRVQRCKPELVAPAKSTPQELKPLSDIDDQDGLRFQIPFILFYPYQPSMAGKDHVQVIRKGLAQTLVFYYPFAGRLREGPGRKLMVDCNGKGVLFIEADADVTLPQFGDALHPPFPYFEELLHDVPGSEGIINCPLLLIQATRLKCGGLILALRLNHAMSDRSSLVQFLKAMAQIVKGASKPSSILPIAALLRLVPHHLAQSTTIFEVLTACLWHCRTRALHPPPEEEVRLMCPVSVHTKLKPPLPVDYNGNGVVYGGPAKGGTTLVPEMTSLYITFEKANGEKGTAVSVSLPAQAMERFEGELDEMLMSHALPCAPQTISSL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1220 361 Gene3D - 39 266 IPR023213 -
Glsi06g1220 361 PANTHER ACYL TRANSFERASE 4 239 294 - -
Glsi06g1220 361 Pfam Transferase family 241 292 - -
Glsi06g1220 361 Pfam Transferase family 41 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1220 Glsi-ChrGlsi06 20243188 20253013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1220 48 297 Monolignol Biosynthesis Gene Families AT5G48930 26.471 3.48e-23 98.2