Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1187 ATGCAACTTTTCATATCCTATGCAAAGTTGTTGACACTTGTGTTAATTTACCGTGTTTACATTGGTTTTGCCAGTGCAATAGCTTTTGGTGTTCTGAATTTCTTTAGATCTCTCTTTAGCAATCTTAATGAATCTATGATTGAACGTGATGCAGGAGTGAAAAGCTCTGGATCTCTAATACCTGGTCACACTGTTAAGGGAAAGGGATTCATTGCCAAAGACATAGGGTTTCTAAACACCGCAGGTGCATCAAAGCACCAAGCCGTGGCACTCCGATCAGGCTCAGACCAATCTGTGTTCTTTAGGTGCTCTTTTGATGGCTACCAAGACACTCTATATGCTCATTCCAACCGACAGTTCTACTCAGAATGTGACATCACAGGAACCATAGACTTCATTTTTGGAAATGCAGCTGTAGTCTTCCAAAACTGCAACATCAAACCTAGGCAGCCCCTACCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAGGACCCAAACCAGAACACTGGGAGTATAATCCAGAAATCTGCAATCTCAGCACTGGATAGTCTAACAGCTCGAACATACCTTGGTAGGCCATGGAAAGAGTACTCCACCACCGTCATTTCACAAATTTTCCATCACCGAAATATAAATTCAAGGTCAAAGACAATTAACAGAGTCCAAAAGCACCTCAGTAGAGCTGAACAAAATTCAAGCAAAGATTAA 714 0.4202 MQLFISYAKLLTLVLIYRVYIGFASAIAFGVLNFFRSLFSNLNESMIERDAGVKSSGSLIPGHTVKGKGFIAKDIGFLNTAGASKHQAVALRSGSDQSVFFRCSFDGYQDTLYAHSNRQFYSECDITGTIDFIFGNAAVVFQNCNIKPRQPLPNQFNTITAQGKKDPNQNTGSIIQKSAISALDSLTARTYLGRPWKEYSTTVISQIFHHRNINSRSKTINRVQKHLSRAEQNSSKD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1187 237 Pfam Pectinesterase 64 214 IPR000070 GO:0030599|GO:0042545
Glsi06g1187 237 Gene3D - 39 236 IPR012334 -
Glsi06g1187 237 PANTHER PECTINESTERASE 64 212 - -
Glsi06g1187 237 SUPERFAMILY Pectin lyase-like 63 215 IPR011050 -
Glsi06g1187 237 ProSitePatterns Pectinesterase signature 2. 126 135 IPR033131 -
Glsi06g1187 237 Pfam Cytidylyltransferase family 7 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1187 Glsi-ChrGlsi06 18950606 18954405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1187 65 206 Carbohydrate Esterase AT1G53840 73.944 6.35e-74 233