Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1184 ATGAAGGCCGTGCCCTTAACCTTCGAGGAATTTCGAGGGAAGGTGGTTTTAGATTTTGCTTCTGCTGCTGTTTCAGATTCATTTTCACTGCCTTCTCAAGAGCAACTGCTGCAAAAGTGGAATACCCACCACGAACATTCCTCATCCACACTGTCTTCCTCACACGGCAGCAGCAGCGGCGGCGGCGTCGGTAGCGGCAACGGCGGCGGTGTCGTTAGCGGCAGTGGCTGCGGCTCAACCGATAGCACCACCGGCGCAGCAGGTAAAGTCTCCGGCGAAAACCCATCTCACACAGCGTTAGACGTTGCCCCGGAAAGATGCGGGATGGGAATGGAGGACTGGGAGAGTGTCTTATCTGAGTCACCTGGTCAAGATCAGTCCATTCTGAGATTGATTATGGGAGACATTGAGGACCCGTCTGTGGGTTTGAGCAAGCTTTTGCAGAGTGGCAGTGGTTCTCAAGATGTTGAATTCAATGGAGGAGGTTTTAGTGTGATGGATCAAAGTTCTGCCCTTGACTCCATTACTAGTGCCAATTTTGTGAGCAGCATTGACTCTTCTTCTGGACCTGGAAATTGCTCTGATTTCCCTTTCAATACACACAACTTGAACTCTCATGTTGCAAGGGTTGTTTCGGCTGCAAATCCAAACCCTATGTTCCCTGCTTCAGCTACCAATCTCTCTCCAGTTTCATTTCCTCCAGGTATGTTTCCGCCCCAACAACAGCAAGCTATGGAGTCTTTGGATGAGAAGCCACAGATTCTCAATTCTCAGTTCTATTTGAACCAAAATCAAACTCAGTTTATTCAGAACCCAGCTTTGGTCATGCCTCTGACGTATTCCCAACTGCAAGAGCACCAGCTTCTTCCTCAGCCTCCGGCGAAGCGCCTTAATTGTGGCCCTGTTGGACCTAATTATCAGGTCCCAAAGGCATCCTTTTTGGATTCTGGGCAAGATCTCTTTCTCCGGCGGCAGCAACCACCACAGCTTCAGTTGCTTCATCATAATCTGCAACAGCGGCCATCCATGGTGGTAGCACCGAAGCAGAAAATGGTGAGCCCCGGCGAAGAGTTGGCGAATCACCAGCTTCAGCAAACCATAATCGACAAGCTTTTTAAGGCCGCAGAGATGATCGAAACCGGCAATCCGGAACTCGCGCAAGGGATATTGGCGCGGCTCAATCACCAACTTTCCCCGATTGGTAAGCCTTTTCAAAGGGCTGCTTTTTACATGAAGGAGGCCTTACAATTGCTTCTCCATTCAAACACAAACAATTCTCTGGCCTTCTCACCCAGTGGCCTATTACTCAAGATTGGGGCTTACAAATCATTCTCAGAAATCTCCCCAGTTCTGCAGTTTGCCAATTTCACTTGCAACCAAGCACTGCTTGAAGCTGTGGAAGGGTTTGATCGAGTTCATATTATAGATTTTGATATTGGGTTTGGTGGACAGTGGTCATCTTTCATGCAAGAATTAGCACTCAGAAATGGTGGCGCACCTTCACTCAAAATCACTGCATTTGCATCCCCTTCCAACCACGACGAAATCGAGCTCAGTTTCACCCAAGAAAATCTGAAGCAATATGCTAGTGAGATTAACATACCTTTTGACCTTGAGATTCTTAGCCTTGAGTCATTGAACTCTGCTTCCTGGCCTCAGCCTCTTCGTGATTGCGAAGCCATAGCTGTTAACTTGCCCATTGGCTCCTTCTCCTTTTACCCATCATGTCTTCCTTTGGTCCTTCGCTTTGTGAAGCAGCTCATGCCCAAAATCGTGGTCACTTTAGACAGAAGCTGCGATCGCACAGATGCACCATTTGCCCAGCATCTGGTTCATGCCCTTCAGTCTTATTCTGGGCTGCTAGAATCACTTGATGCCGTTAACGTTAACCTTGATGTGCTTCAGATGATTGAAAAGTACTTTCTTCAACCAGCTATAGAGAAGCTTGTTCTGGGTCGTCACCGTTTGCAGGAAAGAATAGCTCCATGGAAGACCCTTTTTTTGACTTCTGGGTTCTCACCATCCACATTCAGTAGCTTTACAGAGTCCCAAGCAGAGTGTCTGGTGCAGAGGACTCCTGGTAGGGGATTTCATGTGGAGAAGAGGCAATCTTCCCTGGTTCTATGCTACCAGAGGAAGGACCTTATTTCAGTATCAACTTGGAGATGCTGA 2172 0.4807 MKAVPLTFEEFRGKVVLDFASAAVSDSFSLPSQEQLLQKWNTHHEHSSSTLSSSHGSSSGGGVGSGNGGGVVSGSGCGSTDSTTGAAGKVSGENPSHTALDVAPERCGMGMEDWESVLSESPGQDQSILRLIMGDIEDPSVGLSKLLQSGSGSQDVEFNGGGFSVMDQSSALDSITSANFVSSIDSSSGPGNCSDFPFNTHNLNSHVARVVSAANPNPMFPASATNLSPVSFPPGMFPPQQQQAMESLDEKPQILNSQFYLNQNQTQFIQNPALVMPLTYSQLQEHQLLPQPPAKRLNCGPVGPNYQVPKASFLDSGQDLFLRRQQPPQLQLLHHNLQQRPSMVVAPKQKMVSPGEELANHQLQQTIIDKLFKAAEMIETGNPELAQGILARLNHQLSPIGKPFQRAAFYMKEALQLLLHSNTNNSLAFSPSGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRVHIIDFDIGFGGQWSSFMQELALRNGGAPSLKITAFASPSNHDEIELSFTQENLKQYASEINIPFDLEILSLESLNSASWPQPLRDCEAIAVNLPIGSFSFYPSCLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFAQHLVHALQSYSGLLESLDAVNVNLDVLQMIEKYFLQPAIEKLVLGRHRLQERIAPWKTLFLTSGFSPSTFSSFTESQAECLVQRTPGRGFHVEKRQSSLVLCYQRKDLISVSTWRC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1184 723 MobiDBLite consensus disorder prediction 40 101 - -
Glsi06g1184 723 MobiDBLite consensus disorder prediction 40 64 - -
Glsi06g1184 723 Pfam GRAS domain family 368 722 IPR005202 -
Glsi06g1184 723 ProSiteProfiles GRAS family profile. 358 722 IPR005202 -
Glsi06g1184 723 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 327 718 IPR005202 -
Glsi06g1184 723 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1184 Glsi-ChrGlsi06 18727545 18729716 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1184 367 723 GRAS Transcription Factor Family AT4G00150 63.333 8.81e-150 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi06g1184 GRAS 6.6e-93 CL0063