Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1175 ATGCCCCTGGTTTTCTCTTCAATGTTGGGAACCAGTTATCCATCGCAAATGTTTCTCGGTCTTCATTTTGTTCTCTTTGGTTTTGATCCCATCAGCGAAAGCAAGGTTCGATTCAAGCTTATAAATGGCGGTGGAGTTGATGTAGGTCATTACAGTCCAAGTTGTACACATTTCATTGTGGGCAAGCTTGCATATGAAGATCCTGTTTGCGTTGCTGCAAGAAATGATGGGAAGACGCTTGTCACTGCGTTGTGGGTTGATCATAGTGCTGATATTGGAATGCCTGTTGATGCTGCATCGGTTATGTACAGGCCTCTAAAAGATTTAAATGGAATACCGGGTGCCAAGAATTTGATTGTGTGCTTGACGGGGTATCAACGTCAGGATCGGGATGACATTATGACAATGGTTGGCCTGATGGGTGCACAATTTTCAAAACCATTGGTAGCAAACAAGGTTACTCATCTTATATGCTACAAATTTGAAGGGGAGAAGTATGAGCTTGCCAAGAGATTGAAGACAATTAAGTTAGTGACTCATCGGTGGCTGGAAGATTGTTTAAAAGATTGGGTGCTTCTTCCTGAAGATAAATATATATCAAGAGGTGAGGCATCTTATCATGTCACAATGCAAAATGCACCTGGTCCTTGTCTGCTCTCGCCTTATGAATCTGCAATGTTCACTGTAATGTTGCAAAATGTTCTTGGGGGGAGTGGTTATGAACTGGAGATAATGGCGGCAGAGGCTAAAGATTCTAAAGAAAAAGCTAAAGATCACGTGCCAGGGAAATCTGGGGGAAGAAATCTAATCAAGAGTCCCGTTAGTTCAAAAATTAGTACAGCTACAACCCATAAATTGTCAAAATCAGCGAGAGAGGTAGCAAATGCCTTCCCAGATTCTACTGCTCCTGAGGGATCGCTAAAAGTGAATAAGGGGCATGAGACTCATGACTCATTTATTCTAGAATATGAGAACATATCCGATCAAGCCTTTTGCTTTTGTCATGTTGATGATCTAAAAATAAGCCTTATTTTTATTTTTTCTGTTGTTGTGCAATGTAAATATCCAATGAATCGACAATATCCAATAATACAGTTATGTATGTTTGATTGGTGA 1116 0.4041 MPLVFSSMLGTSYPSQMFLGLHFVLFGFDPISESKVRFKLINGGGVDVGHYSPSCTHFIVGKLAYEDPVCVAARNDGKTLVTALWVDHSADIGMPVDAASVMYRPLKDLNGIPGAKNLIVCLTGYQRQDRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGEKYELAKRLKTIKLVTHRWLEDCLKDWVLLPEDKYISRGEASYHVTMQNAPGPCLLSPYESAMFTVMLQNVLGGSGYELEIMAAEAKDSKEKAKDHVPGKSGGRNLIKSPVSSKISTATTHKLSKSAREVANAFPDSTAPEGSLKVNKGHETHDSFILEYENISDQAFCFCHVDDLKISLIFIFSVVVQCKYPMNRQYPIIQLCMFDW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1175 371 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 14 199 IPR044254 -
Glsi06g1175 371 SMART BRCT_7 113 190 IPR001357 -
Glsi06g1175 371 SMART BRCT_7 15 93 IPR001357 -
Glsi06g1175 371 Pfam twin BRCT domain 118 182 IPR001357 -
Glsi06g1175 371 SUPERFAMILY BRCT domain 14 98 IPR036420 -
Glsi06g1175 371 Gene3D BRCT domain 7 102 IPR036420 -
Glsi06g1175 371 SUPERFAMILY BRCT domain 116 200 IPR036420 -
Glsi06g1175 371 ProSiteProfiles BRCT domain profile. 116 200 IPR001357 -
Glsi06g1175 371 Gene3D BRCT domain 106 214 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1175 Glsi-ChrGlsi06 18422522 18425182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1175 136 258 Core DNA Replication Machinery Family AT4G02110 53.659 1.33e-32 127