Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1163 ATGGTGTCACTGACACCACTTCTTATCGTTCTAATTTTGCCTCTTTTGCTATTGTTCTTCCTCCATAAACACAGAACCACCATTAATAAGCCATCCCTTCCACCAGGTCCTAGAGGCCTTCCCATCATCGGCAATCTCCATCAGCTCAATAGTTCTTCTCTATATCTGAACCTCTGGCAGCTCTCCAAGAAATATGGTCCCCTCTTTTCCCTTCAACTCGGTTTAAGGCCTGCCCTCGTTGTTTCATCACCAAAAATAGCCAAAGAGGCCCTGAAAGACCATGACATTGAGTTCTCTGATAGACCCTCCTTGCTAGGCCAACAGAAGTTATCTTATAATGGGTTAGAGATTATTTTCTCTCCTTACAATGATTATTGGAGAGAAATCAGAAAAATCTGTGTTGTCCACATTTTTAGCTCAAGGCGTGTCTCAAAGTTTTCTTCTGTCAGACAATACGAGGTTCGTCAAATGATGAGAAAGATCTCAGGACATGCTGCTTCATTGAAAGTTACGAACTTGAATGAGACACTAATGTCTCTTACAAGCACTATAATTTGCAGGGTTGCTTTTGGGAAAAGGTACGAGGAAGAAGGAGTTGAGAGAAGCAAGTTCCATGGGCTACTTAATGAGTTGCAGGCCATGATGGGTAGCTTCTTTTTCACAGATTATATTCCTTTCTTAGGGTGGATCGATAGATTCAGAGGATTGATTGGTCGTCTTGAAAGAAACTTCAAGGAGTTGGACGCGTTTTACCAGGAAGTCATCGACGAACACCTTGATCCAAGAAGACAAAAACCTGCAGAAGAAGAGGATATAATTGATGTCTTGCTTCATCTGAAGAAACAGCGTTGGTTTTCAATAGATCTCACTTTGGACCACATCAAAGCTGTCCTCATGGACATTCTTGCAGCAGCAACAGATACAAGCGCAGCCACGTTAGTTTGGGCTATGACCGAGCTAATGAAAAATTCGAGAGTGATGCAGAAAGCACAAGCGGAGGTTAGACAACTGTATGGTACGAAAGATTTTATAGATGAAGATGACATTAAAAAACTTACTTATCTGAAGGCAGTGATCAAAGAGACATTGAGATTGCACCCACCAGCACCACTACTTGTACAAAGAGAAACAAATAAAAAATGCATCATAGAAGGGTATGAAATTCCAGCCAAAACATTAGTATTTGTGAATGCTTGGGCTATTCAAAGAGACCCTGAAGCATGGAAAGACCCAGAAGAGTTTTATCCCGAAAGGTTTGTGGATAGTGCCATTGATTTTAAGGGACAAAATTTTGAGCTGATTCCATTTGGGGCAGGCCGAAGAATGTGCCCAGGCTTACCCATGGGAGTTGCTACAGTGGAGCTTATACTTGCCAACCTTCTTTATTCATTTGATTGGGAAATGCCTGCAGGGACGAAGAGAGAAGATGTAGACACGGAAGTGCTCCCAGGAATTACCCAACATAAGAAAAATCCTCTATGCCTTGTTGCCAAGAATCTAAGGAGCACAAGTATCAATACAAATTGGGGATATGACCCAATATAA 1545 0.4175 MVSLTPLLIVLILPLLLLFFLHKHRTTINKPSLPPGPRGLPIIGNLHQLNSSSLYLNLWQLSKKYGPLFSLQLGLRPALVVSSPKIAKEALKDHDIEFSDRPSLLGQQKLSYNGLEIIFSPYNDYWREIRKICVVHIFSSRRVSKFSSVRQYEVRQMMRKISGHAASLKVTNLNETLMSLTSTIICRVAFGKRYEEEGVERSKFHGLLNELQAMMGSFFFTDYIPFLGWIDRFRGLIGRLERNFKELDAFYQEVIDEHLDPRRQKPAEEEDIIDVLLHLKKQRWFSIDLTLDHIKAVLMDILAAATDTSAATLVWAMTELMKNSRVMQKAQAEVRQLYGTKDFIDEDDIKKLTYLKAVIKETLRLHPPAPLLVQRETNKKCIIEGYEIPAKTLVFVNAWAIQRDPEAWKDPEEFYPERFVDSAIDFKGQNFELIPFGAGRRMCPGLPMGVATVELILANLLYSFDWEMPAGTKREDVDTEVLPGITQHKKNPLCLVAKNLRSTSINTNWGYDPI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1163 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Glsi06g1163 514 FunFam Cytochrome P450 83B1 20 496 - -
Glsi06g1163 514 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 Pfam Cytochrome P450 34 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PANTHER CYTOCHROME P450 71B11-RELATED 17 498 - -
Glsi06g1163 514 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1163 514 CDD CYP71-like 64 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1163 Glsi-ChrGlsi06 17515023 17517572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1163 7 496 Cytochrome P450 AT4G31500 49.087 5.27e-171 490