Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1162 ATGGATATTCTTGTAGGAGGCACAGATACAAGCGCAGCTGCATCAGTTTGGGCTATGACAGAGCTAATGAAGAATCCAAGAGTAATGCAAAAAGTTCAAGCGGAGGTTAGAAAATTGTATGGAAATGATAACTCTGAAAGTTCAATCACAAAATGGTCAAAGAAAAGCAGACAAAGTCGTTTAACAAAGTGGGTGGAAGGAAACTGTTTCTGCCCTTGTAGTATAAGGTTAAACTTGGTGCTAGACGAGGCTGACAAAATGCTTCAACTTATTCCAAGGAAACTCATAATTTTGGATGTGCAATACCTCCTTCAGGAAATAGACCCAATTTCATATGAATATGATGTTCCAAGAGCAGTCGTTGGAGGGCCAGAGGGGATATAG 384 0.401 MDILVGGTDTSAAASVWAMTELMKNPRVMQKVQAEVRKLYGNDNSESSITKWSKKSRQSRLTKWVEGNCFCPCSIRLNLVLDEADKMLQLIPRKLIILDVQYLLQEIDPISYEYDVPRAVVGGPEGI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1162 127 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 80 88 IPR000629 -
Glsi06g1162 127 Gene3D Cytochrome P450 1 57 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1162 127 Pfam Cytochrome P450 1 45 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1162 127 SUPERFAMILY Cytochrome P450 1 45 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi06g1162 127 PANTHER CYTOCHROME P450 71B11-RELATED 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1162 Glsi-ChrGlsi06 17509676 17512534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1162 1 50 Cytochrome P450 AT5G57260 52.000 7.68e-12 59.3