Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1153 ATGGGGAAGATTAGGGGATTCAAGCTTGGAAGACGCCTTATCCGAGTTTCCAGATGGATCTGCAGAAAAATCCGGTTCCGACCCAGATACCAGCGATTGGGTTCGGCTCCGTCGCTGGCGACGAAGCCCATAGCGAAGCTTCTCACTTGGGGTCGCAAGTTAACGAAACGAGCCAGATCCCTATGCTCCGGGTCCGGTTATATCCCCATTGGAGCAGACCCGGTTCAGGACAAGCCACCTGCTGTTCCGAAGGGACACTTAGCCGTGTACTTGGGCCAGAGCGACGGTGAGTTTCACCGGGTCTTGGTGCCTGTGATTTACTTCAACCATCCCTTGTTTGGTGAGCTGCTAAGAGAAGCAGAGAAGGAGTTTGGGTTTCAGCACCCAGGGGGGATCACTATTCCTTGCCGATTCACGGAGTTCGAGCAGGTCAAGACCCAAATTGCAGCCGGGTCGAGCCGCGGTGTTGGTCGGAGGATGGCCTGGCGGCCGCACCATTAG 501 0.5609 MGKIRGFKLGRRLIRVSRWICRKIRFRPRYQRLGSAPSLATKPIAKLLTWGRKLTKRARSLCSGSGYIPIGADPVQDKPPAVPKGHLAVYLGQSDGEFHRVLVPVIYFNHPLFGELLREAEKEFGFQHPGGITIPCRFTEFEQVKTQIAAGSSRGVGRRMAWRPHH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1153 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 143 IPR003676 GO:0009733
Glsi06g1153 166 Pfam Auxin responsive protein 65 144 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1153 Glsi-ChrGlsi06 17319076 17319576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1153 79 141 Calmodulin-binding Proteins AT3G43120 49.206 5.64e-16 69.3