Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1136 ATGTCACTTATTTCTGACGAGCTCTACGAGAATACTGCAGAAGTCGATAAAGCTCTCATTTTAGATCGCTATTGCGGGTATGATTTGCGTATGCCACCGGGAAGTTTTTGGAACAGATCTTTAGCTGAGAAAGTTAAGGCCAATAATTTGAATTCTCCAACAAAATGTCGGGTGAAAGATGCTATCGCACTGATGGAGATAAATTTTGATTCTAGCAAGGGAATAAAAGAATACAAAAGTGGGGGATTAGGTCAAGGAAGGCCAGAGGTAGCGTTTGGGGATTCTAAGGGTATTAGCATGCTGCAAGGCAGAGAAGCAATGAGGAGAGATTTTTCACTAGTGTTAGGCTATGATTATCCAAGGGTCACAAGTGAGGATAATGCAAAACTGGTGAAGCTTGTAATGAATAAAGAAGTGAACAAGGTGCCTTTTCAATTAGGAGCCTTGAAAGCTCCATGTCAGAATGGTTACTGTAGAGTCTTTTATCAATCGTGGGATAAGGTGAGGAACCAAGTAATCAATGTGGTTAAGGAGAATGTTCAAGAAAGGAAGTCTGATGTGAGGCATAGTTCATTCGTATCTCCCCTTATGAACCTTTGGAATTCCATATGGGGACATAAAGTTCCTCCTTATTTGAAACACTTTGTACAGAGGGCTTATATCCTATCACAACTGTCTAAACAGAATTTTTTCAATTGGAAGTGTGCACCAAATCTTCCTCGTCCAATTTGCCTGGTGAAGGTAAATTCAGTTGAGCATATTATTCTATTGTGTGACTGGCTGAGAAGGCATGGGTCTTTGATGGGGGGTGAAGATGTGATTCCTGAATATGCTCCCATGTTGAAGGTGTTAACTTCAATTGAGGCACTTGACATCATAAATGAAACTGTAAAAAAATGGATACGTTGTAATCGTAGAATACCTTTCATGTTTGAGATCAATAGCAGCTTTCCGTATCATGTAAATCTCAGTACAAAAGGCTATCCATCATTGATATACAGTGGTGATCATGACATGTTAGTTCCTTTCTCATCAACTCAAGCATGGATAAGATCTTTGAATTACTCCATCGTTGATGATTGGAGGCCATGGTATGTAAACGGCCAAATTGCAGGATACACAAGGACTTACTCCAATCGGATGACATTTGCTACTGTGAAGGGTGGAGGACATACAGCTGCAGAGTTCAAGCCTGATGAATGTCTTGCAATGTTAATTAGGTGGATGTCTAGTAGGCCGCTCTAG 1245 0.4032 MSLISDELYENTAEVDKALILDRYCGYDLRMPPGSFWNRSLAEKVKANNLNSPTKCRVKDAIALMEINFDSSKGIKEYKSGGLGQGRPEVAFGDSKGISMLQGREAMRRDFSLVLGYDYPRVTSEDNAKLVKLVMNKEVNKVPFQLGALKAPCQNGYCRVFYQSWDKVRNQVINVVKENVQERKSDVRHSSFVSPLMNLWNSIWGHKVPPYLKHFVQRAYILSQLSKQNFFNWKCAPNLPRPICLVKVNSVEHIILLCDWLRRHGSLMGGEDVIPEYAPMLKVLTSIEALDIINETVKKWIRCNRRIPFMFEINSSFPYHVNLSTKGYPSLIYSGDHDMLVPFSSTQAWIRSLNYSIVDDWRPWYVNGQIAGYTRTYSNRMTFATVKGGGHTAAEFKPDECLAMLIRWMSSRPL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1136 414 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 85 398 IPR001563 GO:0004185|GO:0006508
Glsi06g1136 414 Pfam Serine carboxypeptidase 288 410 IPR001563 GO:0004185|GO:0006508
Glsi06g1136 414 SUPERFAMILY alpha/beta-Hydrolases 220 414 IPR029058 -
Glsi06g1136 414 Gene3D alpha/beta hydrolase 133 413 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1136 Glsi-ChrGlsi06 16608592 16622837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1136 288 414 Calmodulin-binding Proteins AT2G22960 63.780 1.13e-52 172