Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1133 ATGCTGCACCTTTGCTTCAGCCTACAAAATATCAACAGTTTGATCATATTAAATAGTATTCCTAGGCATTCAATCAAGCCATCCTTGCCTAAACGTGCTGAGACATTAATGGCCTACATAAAGGCCTCTTGCAAGACCACTTTCTACCCAGATCTATGCTTCCACTGCCTCACCAAGTTTGCCAATTCCAACATAAAAAACCCACAACAACTAGCTCAGCTTGCCTTCTCCGTGAGCCTCTCCAAAGCACTATACACAAGGGCATATTTGTTGAAAGTGGCCAATCAGCTCAATGCAATGAAGAATAACAAAGATTACCTAGTTGTGCAAGATTGCTTGAGGAAAATCAATGATAGTGTGGACCAACTTGGCCAGTCCATCAAAGAGCTTCCCCCGGTTGAACTGGAAAGCGGCCGTCAACGACGAGTTCTTGTGGTACATTAG 444 0.4369 MLHLCFSLQNINSLIILNSIPRHSIKPSLPKRAETLMAYIKASCKTTFYPDLCFHCLTKFANSNIKNPQQLAQLAFSVSLSKALYTRAYLLKVANQLNAMKNNKDYLVVQDCLRKINDSVDQLGQSIKELPPVELESGRQRRVLVVH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1133 147 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 131 IPR035513 -
Glsi06g1133 147 Pfam Plant invertase/pectin methylesterase inhibitor 39 131 IPR006501 GO:0004857
Glsi06g1133 147 SMART PMEI_2 35 146 IPR006501 GO:0004857
Glsi06g1133 147 CDD PMEI-like_3 42 130 - -
Glsi06g1133 147 NCBIfam pectinesterase inhibitor domain 14 130 IPR006501 GO:0004857
Glsi06g1133 147 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 142 IPR035513 -
Glsi06g1133 147 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1133 Glsi-ChrGlsi06 16548530 16550188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1133 30 130 Carbohydrate Esterase AT5G53370 26.923 7.77e-06 42.7