Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1132 ATGAAGAATAATAAAGATTACCTAGTTGTGCAAGACTGCTTGAGGCAAATCAATGATAGTGTGGACCAGCTTGGCCAGTCCATCAAAGAGCTTCCCCGGTTGAACCTGAATGCGGCCATCAACGACGACTTCTTGTGGTACATTAGTAACGTTGAGACATGGGTGAGCACTGCCTTAACTGATGCTAGCACCTGCGTGAACTCATTCCCTGGTCATAGAATGAGTAAATTGAAGGCTTCCATTAAAGTTAGAGCCCTGAACGTTGCAGAGGTTACTAGCAATGCGCTTGCCTTGTTTCAGAGATATACGGCTAAGTACAGAGCAGCTGCAGTAGCTAAAGCCATCAATAAACCCCGAAGACTATACAAGCTATGCCATCCTTTATTTGGGCAAAACCCACCCTTTGTTTTTTCATTACTAGCTTCAAGTCTTCTTGCTTCATTTTCAACTGGTGTCCTTCAAGTTCCACTTGAAGAGACGAAAGACTATGGTGCTCTTGACCATGATCCTTTCACTACTCATTCTTCGAAATTTCGAAATTCTTCAGCTCACATTGCTCTCTATCATGCTTCAGGTCATGCTCTGATTTACTGTTTTAGAAACCTCCAGTCAAAAGAACAAAAAAGACCAGCCTCCTTTTAA 642 0.4268 MKNNKDYLVVQDCLRQINDSVDQLGQSIKELPRLNLNAAINDDFLWYISNVETWVSTALTDASTCVNSFPGHRMSKLKASIKVRALNVAEVTSNALALFQRYTAKYRAAAVAKAINKPRRLYKLCHPLFGQNPPFVFSLLASSLLASFSTGVLQVPLEETKDYGALDHDPFTTHSSKFRNSSAHIALYHASGHALIYCFRNLQSKEQKRPASF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1132 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 101 IPR035513 -
Glsi06g1132 213 CDD PMEI-like_3 1 104 - -
Glsi06g1132 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 98 - -
Glsi06g1132 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 102 IPR035513 -
Glsi06g1132 213 NCBIfam pectinesterase inhibitor domain 4 102 IPR006501 GO:0004857
Glsi06g1132 213 SMART PMEI_2 3 98 IPR006501 GO:0004857
Glsi06g1132 213 Pfam Plant invertase/pectin methylesterase inhibitor 8 98 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1132 Glsi-ChrGlsi06 16537234 16539616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1132 4 137 Carbohydrate Esterase AT3G05620 24.286 9.50e-06 43.9