Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1131 ATGGCACAGCTCAACCTCAGATTGCTCGTCATTTTCCTCTCTCTCTTGTCAATTTCGGAAAGTGCTGAGACAATGGCCTACATAAAGACCTCTTGCAAGAACACACTCTACCCACGTCTATGCTTCCAATGCCTAGCCAACCTCTCCAAAGCACTATCCACAAGGGCATACTTGTTGAAACTGGCCAATCAGCTCAATGCAATAAAGAATAACAAAGATTACCTAGTTGTGCAAGACTGCTTGAGGCAAATCAATGATAGTGTGGACCAACTTGGCCTGTCCATCAAAGAGCTTCCCCGGTTGAACAGGAATGCGGCCATCAACGACGACTTCTTGTGGCACATTAGTAACGTTGAGACATGGGTGAGCACTGCCTTAACTGATGCTAGCACCTGCGTGGACTCGTTCCCTGGTCATAGAATGAGTAAATTGAAGGCTTCCATTAAGGTTAGAGCCCTGAACGTTGCAGAGGTTACTAGCAATGCGCTTGCCTTGTTTCAAGGATATACAGCTAAGTACAGAGCAGCTGCATTAGCTAGAGCCATCAATAAACCCTGA 558 0.4624 MAQLNLRLLVIFLSLLSISESAETMAYIKTSCKNTLYPRLCFQCLANLSKALSTRAYLLKLANQLNAIKNNKDYLVVQDCLRQINDSVDQLGLSIKELPRLNRNAAINDDFLWHISNVETWVSTALTDASTCVDSFPGHRMSKLKASIKVRALNVAEVTSNALALFQGYTAKYRAAALARAINKP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1131 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 165 - -
Glsi06g1131 185 SMART PMEI_2 23 165 IPR006501 GO:0004857
Glsi06g1131 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 167 IPR035513 -
Glsi06g1131 185 Pfam Plant invertase/pectin methylesterase inhibitor 27 165 IPR006501 GO:0004857
Glsi06g1131 185 NCBIfam pectinesterase inhibitor domain 50 169 IPR006501 GO:0004857
Glsi06g1131 185 CDD PMEI-like_3 30 171 - -
Glsi06g1131 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 168 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1131 Glsi-ChrGlsi06 16487103 16487720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1131 21 170 Carbohydrate Esterase AT1G53830 24.706 4.10e-13 65.1