Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1129 ATGAGCTTCGACAAGGCAAAGAACGACACTGTCATCAGCTCCAGTAAGGGGAGATCTAGTTGGATCACGCTTGCAGCTAATTGCAATTTTTGTCCCCAAGATGGCACAGCTCAAGTTAACTTCACATTACCAATCTTTTTGCTCTCTCTCTTTTCAATTTTTGCCCCAGTTGAGCCATCCTTGCATAAACGTGTTGAAACAATGGCATACATAAAGGCCTCTTGCAAGATCACTCTCTACCCAGAGCTATGCTTTCACCGCCTTGCCAAGTTTGCCCATTCCACCTTGGAAAACCCACAACAGCTAGCTGACACCGCCTTGTCTGTGAGCCTCTCCGAAGCACTAAGCACGAGGATATACCTGTTGAAAGTGGCCAATGAACTCAAAGCAATACAGAATAATAAAGATTACCTAGCTGTGCAATATTGTTTAAGGCAAATAAATGACAGTGTGGACCAGCTTGGCCAGTCCATCAAAGAGTTTCACTGCTTGAAAAGAAATGGCGCTGCCATACATGATGAGTTCTTGTGGCACATTAGTAACGTTGAGACATGGTTGAGCACTGCCTTAACTGATGCTGGCACCTGCGTGGAATCGTTTCCTGGTCAGCGGATTAGTAAACTGACGGCTTCCGTTAAGGTTAGGGCCCTAAATGTTGCAGAGGTTACTAGCAATGCACTTGCCTTGTTTCATGGATATGCAGCTAAGTACAGAGCAGCTGTAGCAGCTAGAGCCGCCAAGAAACCCTAA 750 0.4573 MSFDKAKNDTVISSSKGRSSWITLAANCNFCPQDGTAQVNFTLPIFLLSLFSIFAPVEPSLHKRVETMAYIKASCKITLYPELCFHRLAKFAHSTLENPQQLADTALSVSLSEALSTRIYLLKVANELKAIQNNKDYLAVQYCLRQINDSVDQLGQSIKEFHCLKRNGAAIHDEFLWHISNVETWLSTALTDAGTCVESFPGQRISKLTASVKVRALNVAEVTSNALALFHGYAAKYRAAVAARAAKKP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1129 249 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 232 IPR035513 -
Glsi06g1129 249 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 231 IPR035513 -
Glsi06g1129 249 PANTHER PECTINESTERASE INHIBITOR-LIKE 46 229 - -
Glsi06g1129 249 SMART PMEI_2 66 229 IPR006501 GO:0004857
Glsi06g1129 249 Pfam Plant invertase/pectin methylesterase inhibitor 70 229 IPR006501 GO:0004857
Glsi06g1129 249 CDD PMEI-like_3 73 231 - -
Glsi06g1129 249 NCBIfam pectinesterase inhibitor domain 40 233 IPR006501 GO:0004857
Glsi06g1129 249 FunFam Pectinesterase inhibitor 3 66 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1129 Glsi-ChrGlsi06 16390726 16393056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1129 36 232 Carbohydrate Esterase AT5G53370 28.241 1.66e-11 62.0