Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1111 ATGGAATCATTTTCTCGTCGGAGAACGATATGGTGGAGAACGGAGCAGCAGAAGATAGTGAGGAAGGTAATTTGGCCGTCAATTCGGGGGCATTATTGTCCGATTTGTTTGAGGGACCTCGAAGATAATTACAGAGAAGCTGCAATTCTCACAGTGTGTATGCACGCCTACTGCATCGAATGCATTCGCAAATGGAGTAATATAAGAAGAAAATGCCCCCTTTGTAATGCTGACTTCAATTCTTGGTTCTGCAAGCTCAGTCTTTCCTCTAGAGAGTTCCAGAAGGAGGTGTTACCTCTTGAAGAAATTTGTGCAAGGCATGTACATGCTCGCAGACTTCTTCGTAGAACGAGAGTGGCATTAGATAATAGGCGAATAAGGGCATTGCCCTGGCGAAGATCATTTGGGCAGCCTGGACTAGTGACTCCAGATGTTATTGCTCAAAGAAAAATTGAATGGCGCGCCAGGTACATAAACTTAATATCATGTTTTACAAAGGTAGATTCCTTAAGTCTAACTATTATCAAATTGAGAAATAGTTCTGTGAAAGAGAAAATGAAGCAAAAGATTGAGCCTTGGATATGGAGGGAGCTACTAGCTGTTCTGGAGGACCCAGATCCAACTGTCATTGTTCATGTGGTGACCTCACAGTTCCTTGCATGGCTGGAGGAGAAAGCTAAATTGCCCTCTGAACAGTTTGATGTTGAAGAGAGGTTTATTTCCCCTCTGCGTCCTTTCCTGCTAGATAAAGCCAGTAACTTTTGGCATGAACTAAGATGTTTTGCTGAGAGTTGTTACAACATGGAAACATATGATGCAGTAGTTGAATATAAACATATGGAGTGA 846 0.4232 MESFSRRRTIWWRTEQQKIVRKVIWPSIRGHYCPICLRDLEDNYREAAILTVCMHAYCIECIRKWSNIRRKCPLCNADFNSWFCKLSLSSREFQKEVLPLEEICARHVHARRLLRRTRVALDNRRIRALPWRRSFGQPGLVTPDVIAQRKIEWRARYINLISCFTKVDSLSLTIIKLRNSSVKEKMKQKIEPWIWRELLAVLEDPDPTVIVHVVTSQFLAWLEEKAKLPSEQFDVEERFISPLRPFLLDKASNFWHELRCFAESCYNMETYDAVVEYKHME 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1111 281 SMART ring_2 33 75 IPR001841 -
Glsi06g1111 281 ProSitePatterns Zinc finger RING-type signature. 53 62 IPR017907 -
Glsi06g1111 281 SUPERFAMILY RING/U-box 27 82 - -
Glsi06g1111 281 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 20 278 - -
Glsi06g1111 281 ProSiteProfiles Zinc finger RING-type profile. 33 76 IPR001841 -
Glsi06g1111 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 96 IPR013083 -
Glsi06g1111 281 Pfam Ring finger domain 32 76 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1111 18 258 C3H Transcription Factor Family AT2G39100 43.922 4.10e-64 201