Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1104 ATGAAGCCTTTTAATCGCTTCAGCACTATGGTATATATGCCCAGTGACTGTGGCAACAAGAAAAGAACATGGCTTGAAGGCATCCGAGGAATTCTTGACCTTTCTCTTCAGGCTACAATTTCAAATATTAAAAGATATGAGGAAATGGCATGCAAGCTATGGTTTTTTAAGGAACAAATGGCAAAGGCTGGTGTATCACCCTCAACAAGGTCAATAACTGATAAAGTTGATCTAGACAATTTGGAGGTTAAACTTGTAGAACTTGAAGTTGAGCTAATTGAGATTAATGCAAATAATGATAAGTTGCAACACAGTTATAGTGAGTTGTTAGAATATAAACTTGTTCTCGAGAAGGTATTTTCAACTCTCCCCTTGGTTAAATTAGGCTGCTTAAGTCAAAGTGGGCATTTCATTGCAAGTTGTTTTGCTGATGAGCTTCTGCAGTTAAATTTCATTCCAACTATATCTTAA 471 0.3631 MKPFNRFSTMVYMPSDCGNKKRTWLEGIRGILDLSLQATISNIKRYEEMACKLWFFKEQMAKAGVSPSTRSITDKVDLDNLEVKLVELEVELIEINANNDKLQHSYSELLEYKLVLEKVFSTLPLVKLGCLSQSGHFIASCFADELLQLNFIPTIS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1104 156 PANTHER VACUOLAR PROTON ATPASES 40 121 IPR002490 GO:0033179|GO:0046961|GO:1902600
Glsi06g1104 156 Coils Coil 78 105 - -
Glsi06g1104 156 Pfam V-type ATPase 116kDa subunit family 41 119 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1104 Glsi-ChrGlsi06 15673949 15679283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1104 41 119 Primary Pumps ATPases(2) AT4G39080 60.000 1.28e-23 94.4