Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1063 ATGAGGGAGCAATCGAGTGAAGGAGATGCTGCGAAGCCATATTCCAGCCGAATCTTAATTCAAACAAAGATATTTTCTTGGCCTGAATGCATGGGATGGATGATTTCAAACGACAGGCTACAGAACAAAGTGACAACAGTTTGCGAGATAGGTCGAAATGTCCCCAGACACAACCAATTGAAGTTTAACGGGGACGATTCTGTGCTCAAGTCAGGCCGTGCTGGTTGTGGGGGTGCTTTGCGTAGTGCCTCAGGGGGCTGGATCCGAGCAACACTGAACTGCAAGGACGTTATAATTGAAACTGACTATTCAGTTGATGTCAACCTGTGCTTGGTTGGATGCAATAAAGAGCATCCCTGTGTTGGGATTGTTTCTCACATCCATAGCTTACTGGAGAAGAGTTGGAAGGTGAAAAGTATAACTGGTAACAAGATCTTGCCTATACTGAAGGCCCGTGGGCTTGCTCCTAAGATACTGAAGGATCTCCGCCACATCATCAAGAAGGCTGTCACTATTAGGAAGCACTTGGATAGAAACATAATGGATAAAGATTCCAAGTTTTTTCTAATTTTGGTCAATAGTAGAATCCATTGCCTTGCTCGTTATTATACAAAGACAAAGAAGCTTCCTCCAGTTTGGAAGTAG 645 0.4403 MREQSSEGDAAKPYSSRILIQTKIFSWPECMGWMISNDRLQNKVTTVCEIGRNVPRHNQLKFNGDDSVLKSGRAGCGGALRSASGGWIRATLNCKDVIIETDYSVDVNLCLVGCNKEHPCVGIVSHIHSLLEKSWKVKSITGNKILPILKARGLAPKILKDLRHIIKKAVTIRKHLDRNIMDKDSKFFLILVNSRIHCLARYYTKTKKLPPVWK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1063 214 Gene3D - 156 214 - -
Glsi06g1063 214 PANTHER RIBOSOMAL PROTEIN S15P/S13E 136 214 IPR023029 -
Glsi06g1063 214 SUPERFAMILY S15/NS1 RNA-binding domain 140 213 IPR009068 -
Glsi06g1063 214 CDD Ribosomal_S15p_S13e 144 214 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi06g1063 214 FunFam 40S ribosomal protein S13 157 214 - -
Glsi06g1063 214 ProSitePatterns Ribosomal protein S15 signature. 172 202 IPR000589 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1063 Glsi-ChrGlsi06 14563636 14568999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1063 136 214 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 77.215 2.60e-35 120