Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1061 ATGTTGGAACTTCACGAAACTTTGCTTGAAAATTTGATTTTATTCTGTTTATTTGTTGATTGTGTATTTTCACTAACGTGGTATTTCCGCTTCAGCTCCTCCCTACAAAAGAACCCCACCAAGCTGACTGAAGATCTCAGCTTAGGATAACATTGTAAGTTTGCCAAGAAGGGTCTAATACCATCTCAAATTGTTGTTATTCTTTGTGATTCTCATGGTATTGCTCAGGTGAAAAGTATAACTGGTAACAAGATCTTGCGTATACTGGCCCGCGGGCTTGCTCCTGAGATACCGGAGGATCTGGACCACCTAATCAAAAAGGCTGTCACTATTAGGAAGCACTTGGATAGAAACAGAAAAGATGAAGATTCTAAGTTTCTGCTAATTTTGGTCGAGAGTAGAATCCATCGCCTTGCTCGTTACTATACGAAGACAAAGAAGCTTCCTCCAGTTTGGAAGTAG 462 0.4026 MLELHETLLENLILFCLFVDCVFSLTWYFRFSSSLQKNPTKLTEDLSLGXHCKFAKKGLIPSQIVVILCDSHGIAQVKSITGNKILRILARGLAPEIPEDLDHLIKKAVTIRKHLDRNRKDEDSKFLLILVESRIHRLARYYTKTKKLPPVWK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1061 153 FunFam 40S ribosomal protein S13 96 153 - -
Glsi06g1061 153 Gene3D - 51 95 - -
Glsi06g1061 153 PANTHER RIBOSOMAL PROTEIN S15P/S13E 52 153 IPR023029 -
Glsi06g1061 153 CDD Ribosomal_S15p_S13e 84 153 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi06g1061 153 ProSitePatterns Ribosomal protein S15 signature. 111 141 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi06g1061 153 Pfam Ribosomal protein S15 96 147 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi06g1061 153 Gene3D - 96 153 - -
Glsi06g1061 153 SUPERFAMILY S15/NS1 RNA-binding domain 80 152 IPR009068 -
Glsi06g1061 153 SMART Ribosomal_S15_2 84 153 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi06g1061 153 FunFam 40S ribosomal protein S13 51 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1061 Glsi-ChrGlsi06 14408348 14409307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1061 28 153 Cytoplasmic Ribosomal Protein Gene Family AT3G60770 75.000 2.00e-58 177